| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1364 |
|---|
| Symbol | |
|---|
| ID | 8118439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1552261 |
|---|
| End bp | 1552935 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644851759 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003003705 |
|---|
| Protein GI | 251788984 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTGT TACTGGTTGA AGATCATCCG GAACTGGCTC ACTGGCTGAA AAAAGCCCTG
AGTGAGGTGG GATTCGCGGT GGATCTGGTC GGCGATGGCG TGGCGGCGGA TCAGCTGTTG
CAGCAGGAAG CGTATACGCT GGTGGTATTG GATGTCTCGT TACCGCGTCT GGATGGCCTG
GCATTACTGG CACGATTGCG TAAACGCGGT CAGAACCTGC CGGTGCTGTT GCTGACGGCC
CGTGCCGAGG TGGCGGATCG GGTCAAGGGG CTGAATCTGG GGGCGGATGA TTATCTCACC
AAGCCGTTTG AACTGGCGGA GCTGGAGGCA CGGTTGCGTG CGCTGCTGCG GCGTAGTCAG
GGGCAAATAC AGGAAGTGCA GCGTCTTGGC GCTCTCAGTT GGCACGATGA AGGCTATTTT
TTGCTCCAGG AGAAACCGCT GGCGTTGACG CCGCGCGAGC AAGCGGTGTT GCATACGCTG
ATGCAGCGCC GTGGTCGTCC GGTATCGCGC CAGTATCTGT ATGAGCAGGT GTTTACGCTG
GCCGATGAGG CCAGCCCGGA CAGTCTCGAT CTGTATGTGC ACCGCATCCG CAAAAAGCTG
GCGGGCAGCG ATGTGATGAT CGTGACGTTA CGTGGGCTGG GGTATAGCCT GGAGTGCAGC
CATGCCGAAA GTTAA
|
|---|
| Protein sequence | MRLLLVEDHP ELAHWLKKAL SEVGFAVDLV GDGVAADQLL QQEAYTLVVL DVSLPRLDGL
ALLARLRKRG QNLPVLLLTA RAEVADRVKG LNLGADDYLT KPFELAELEA RLRALLRRSQ
GQIQEVQRLG ALSWHDEGYF LLQEKPLALT PREQAVLHTL MQRRGRPVSR QYLYEQVFTL
ADEASPDSLD LYVHRIRKKL AGSDVMIVTL RGLGYSLECS HAES
|
|---|
| |