Gene Dd1591_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1352 
Symbol 
ID8118427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand+ 
Start bp1539567 
End bp1540244 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID644851747 
ProductThiJ/PfpI domain protein 
Protein accessionYP_003003693 
Protein GI251788972 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT TGATGGTGTT GACGTCCCAT GATCAGTTGG GAAATACAGG TAAAAAAACC 
GGTTTCTGGC TGGAAGAGTT TGCCGCCCCT TACTACGTGT TTAAAGATGC AGGCGCCGAG 
GTCGTGCTGG CATCGCCGGC TGGCGGCCAG CCGCCGTTGG ATCCGAAAAG CGATTTACCG 
GAATTTCAAA CCGAGCTGAC CCACCGTTTC AAGGCCGATC CGGCCGCTCA GCAGGCACTG 
GCTACGACAG TAAAACTGGA CGGCGTCAGC ATGGATGATT TCGACACGGT GTTCTATCCA 
GGGGGGCATG GCCCGCTGTG GGATTTGGCT GAATCGCCGA CCTCCATTGC CCTGATTGAA 
GCGTTTGAAC GGGCCGGGAA ACCGATTGGT TTTGTTTGCC ATGCGCCCGG CGTGTTGCGC 
CACGTCAAGG CGGCGAATGG TGAGCCGCTG ATCAAAGGCC GTCGGGTTAC CGGGTTTACC 
AATTCGGAAG AAGCCGCGGT GGAATTAACC GATGTGGTGC CGTTTTTGAT TGAAGACGAG 
TTCCAAAAAC TGGGTGGTTT GTACTCCAAG GGACCGGACT GGCACCCCTA TCTGGTTGAA 
GACGGCACGT TGATTACCGG TCAGAATCCG GCCAGTTCGG AAGTGGTCGC CAAAGCATTG 
TTAAAGCAGC TGGCTTAA
 
Protein sequence
MKILMVLTSH DQLGNTGKKT GFWLEEFAAP YYVFKDAGAE VVLASPAGGQ PPLDPKSDLP 
EFQTELTHRF KADPAAQQAL ATTVKLDGVS MDDFDTVFYP GGHGPLWDLA ESPTSIALIE 
AFERAGKPIG FVCHAPGVLR HVKAANGEPL IKGRRVTGFT NSEEAAVELT DVVPFLIEDE 
FQKLGGLYSK GPDWHPYLVE DGTLITGQNP ASSEVVAKAL LKQLA