Gene Dd1591_1280 details

Gene Information

• Locus tag: Dd1591_1280
• ID: 8118673
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 1451151
• End bp: 1453208
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644851674
• Product: Beta-galactosidase
• Protein accession: YP_003003622
• Protein GI: 251788901
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1874] Beta-galactosidase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00156008
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGAT TTTCGCCGTT GAATCCGAAG GTCGAAGGAT TATTACATGG CGCTGATTAT 
AATCCGGAGC AATGGGAGAA TTACCCCGGC ATTATTGATG ACGATATCGC CATGATGAAA 
CAGGTGAAAT GTAATGTCAT GTCAGTGGGG ATTTTCAGTT GGGCTAAACT GGAGCCGCAG 
GAAGGGGTAT ATCGGTTCGA CTGGCTGGAT GAGGTGATTG ATAAATTATA TCAGCAGGGG 
ATTTCGGTGT TTCTGGCGAC GCCCAGCGGC GCGCGTCCGG CCTGGATGTC GCAACGTTAT 
CCGGACGTGC TGCGCGTTGG GCGCGACCGG GTGGCGGCGC TGCACGGCGG CCGCCATAAT 
CACTGCCTGT CATCGCCGGT CTACCGGGAT AAGGTTCAAA AGATCAATAC GTTGTTGGCT 
GAGCGCTACG GGCACCACCC GGCGGTCATC GGCTGGCATG TTTCCAATGA ATACAGCGGC 
GAGTGCCATT GCGAGCGCTG TCAGCAGGCG TTCCGCACCT GGCTTAAAGC GCGTTACCAG 
ACGCTGGATA ACCTCAATCA CGCCTGGTGG AGCGATTTCT GGAGCCACAC CTACAGCGAC 
TGGTCGCAGA TTGAATCGCC GGCGCCGCAG GGTGAAGTAT CCATTCATGG GCTGAATCTT 
GACTGGCGGC GCTTTAATAC CGCACAGGCA ACCGACTTCT GCGCACAGGA AATCGCGCCG 
TTGAAGCGGG TAAACCCGGC CATTCCGGCA ACCACCAACT TCATGGAGTA TTTCTACGAT 
TACGATTACT GGCAACTGTC GCAGGTTCTG GATTTTATTT CCTGGGACAG CTACCCGATG 
TGGCATCGCG ACAAGGACGA CGCCACGCTA GCCTGTTATA TCGCCCTGTT CCATGACCTG 
ATGCGCTCGC TTAAGCAGGG CAAGCCGTTT GTGTTGATGG AATCCACTCC CAGCGTCACC 
AACTGGCAGC CGCTCAGCAA GCTCAAAAAA CCGGGTATGC ATATTCTCTC CTCGCTACAG 
GCGGTGGCGC ACGGTGCGGA TGCGGTGCAG TATTTCCAGT GGCGTAAGAG TCGCGGTTCG 
GTGGAGAAAT TCCACGGCGC GGTGGTGGAT CATGTCGGCC ACATCGACAC CCGAGTCGGC 
CGGGAGGTGG CGCAGCTCGG CCAGATATTG TCGCAACTGA GTGCGGTGGC GGGCAGCCGG 
GTGGAAGCGC AGGTGGCTAT CTTGTTTGAC TGGGAAAGCC GCTGGGCGAT GGATGATGCG 
CAAGGGCCGC GCAATGCCGG GCTGGAGTAC GAAAAAACGG TGGCGGAGCA TTATCGCCCG 
TTCTGGGAGC AGGGAGTTGC GGTTGATGTT ATCAACGCCG ATGGTGATTT CAGCGGTTAT 
CGGTTGCTGG TTGCGCCGAT GCTGTACATG GTACGGCCAG GCTTTGCCGA ACGCGTCGAA 
CAGTTTGTGC GGCAGGGTGG GCAGGTGGTG GTGACCTACT GGAGCGGCAT CGTTAACGAT 
AGCGATCTGT GTTATCAGGG CGGATTTCCC GGCCCGTTGC GCCCACTGTT GGGGATCTGG 
TCGGAAGAGA TAGACTGTCT GGCCGACGGC GAATATAACC GAGTGCTGGG GCTGGCGGAC 
AATGACATCG GGCTTAAGGG GCCGTATCAG GCGCGTCATC TGTGCGAGTT GATCCACCTT 
GAAGGCGCAA CGGCACTCGC CAGTTACTGC GATGATTTTT ACGCCGGCCG GCCGGCGGTA 
ACGGTGAATC GCGTCGGCGA CGGAAAAGCC TGGTACGTGA CCTCGCGTAA CGACCTGGCA 
TTCCAGCGCG ATTTCTTTGC CGCCATCATC AGCGAGCTGG CTTTGCCGCG AGCGCTGGAT 
ATCCCGCTGC CGCCGGCGGT GACGGCCCAT CGCCGTACCA ACGGCGACGA AGAGTTTATC 
TTCATCGAAA ACTACAGTGC GGTGCCGCAA CCCATTCGGT TGCCTGCCGG GTATAGCGAT 
ATGCTGACCG GGTTACCGCT GGCGGATGTC GTGCTTTCCG CCTGGGATTG CCGGGTAATT 
CGTCGCCGTC TGGTCTGA 

 

Protein sequence

MKRFSPLNPK VEGLLHGADY NPEQWENYPG IIDDDIAMMK QVKCNVMSVG IFSWAKLEPQ 
EGVYRFDWLD EVIDKLYQQG ISVFLATPSG ARPAWMSQRY PDVLRVGRDR VAALHGGRHN 
HCLSSPVYRD KVQKINTLLA ERYGHHPAVI GWHVSNEYSG ECHCERCQQA FRTWLKARYQ 
TLDNLNHAWW SDFWSHTYSD WSQIESPAPQ GEVSIHGLNL DWRRFNTAQA TDFCAQEIAP 
LKRVNPAIPA TTNFMEYFYD YDYWQLSQVL DFISWDSYPM WHRDKDDATL ACYIALFHDL 
MRSLKQGKPF VLMESTPSVT NWQPLSKLKK PGMHILSSLQ AVAHGADAVQ YFQWRKSRGS 
VEKFHGAVVD HVGHIDTRVG REVAQLGQIL SQLSAVAGSR VEAQVAILFD WESRWAMDDA 
QGPRNAGLEY EKTVAEHYRP FWEQGVAVDV INADGDFSGY RLLVAPMLYM VRPGFAERVE 
QFVRQGGQVV VTYWSGIVND SDLCYQGGFP GPLRPLLGIW SEEIDCLADG EYNRVLGLAD 
NDIGLKGPYQ ARHLCELIHL EGATALASYC DDFYAGRPAV TVNRVGDGKA WYVTSRNDLA 
FQRDFFAAII SELALPRALD IPLPPAVTAH RRTNGDEEFI FIENYSAVPQ PIRLPAGYSD 
MLTGLPLADV VLSAWDCRVI RRRLV