| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1279 |
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| Symbol | |
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| ID | 8118672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1449815 |
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| End bp | 1451014 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644851673 |
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| Product | Arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_003003621 |
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| Protein GI | 251788900 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000518384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TGATACCCAC CTTACTGGCT GTTTCCCTGT CGCTGGGCGC GATGCCGCTC
ATGGCGGCGG AGTCCGTCGT GATTAAACCA CTGCGCAATG CCCCGGCCGA TTTTATCAAG
GGTGCGGATA TTTCCACCTT GCTGGAAGTG GAGCGCCAGG GCGGCGTGTT TTATGACGAA
AACCACGTGC GCGTCGACCC GGTCGCGTTG CTGAAAAAGA ACGGCGTCAA CTATATCCGG
CTGCGTTTGT GGGTTGACCC GCACGATGCC GCCGGGCGTC CTTACGGCGG CGGTGATAAC
GATCTGGCGA CGACGCTGGC GCTGGCTAAA CGCGTCAAAG CGGCAGGCAT GAAGCTACTG
CTGGATTTCC ACTACAGCGA CTTCTGGACC GACCCCGGCA AGCAGTTCAA GCCGAAAGCC
TGGGCTAACC TGTCCTACGA ACAACTGAAA ACCGCTGTTC ATGACTATAC CCGCGACACC
ATCGCACGTT TTAAGCGGGA AGGGGTACTG CCGGATATGG TGCAGATCGG TAACGAAGCC
AACGGCGGTA TCTTGTGGCC GGAAGGCAAA AGCTGGGGGC AGGGCGGCGG CGAATTCGAC
CGGCTGGCCG GCCTGCTGAA CGCCGCGATC GCCGGCTTGC GTGAAAACCT TAGTTCACCG
GGGCAGGTGA AAATCATGCT GCATCTGGCG GAAGGCACCA AGAACGACAC CTTCCGCTGG
TGGTTTGATG AAATCACCCA ACGCGGCGTG CCGTTCGATG TGATTGGCCT GTCGATGTAC
ACCTATTGGG ATGGCCCGAT CAGCTCGCTG AAAGCCAACA TGGACGACAT CAGCCAACGC
TACAACAAGG ACGTTATCGT GGTAGAGGCC GCCTACGGCT ACACCCTGGC TAACTGCGAC
AACGCCGAAA ACAGCTTCGG CGAAAAAGAA GCGGCGGCGG GCGGTTATCC GGCTACCGTG
CAAGGGCAGG CCGATTTCAT TCGCGACCTG ATGCAAAGCG TAATCGACGT CCCGAAAAAG
CACGGCAAAG GCGTGTTCTA TTGGGAACTG GCCTGGATAA CGCCGGCGGG AAATACCTGG
GCCACCGAAG CCGGCATGAA TTATATCAAC GACCACTGGA AATTGGGCAA CGCCCGTGAA
AATCAGGCGT TATTTAATTG CCAGGGGGAG GTGTTGCCTT CGATAAAAGC CTTTAAATAA
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| Protein sequence | MKKMIPTLLA VSLSLGAMPL MAAESVVIKP LRNAPADFIK GADISTLLEV ERQGGVFYDE
NHVRVDPVAL LKKNGVNYIR LRLWVDPHDA AGRPYGGGDN DLATTLALAK RVKAAGMKLL
LDFHYSDFWT DPGKQFKPKA WANLSYEQLK TAVHDYTRDT IARFKREGVL PDMVQIGNEA
NGGILWPEGK SWGQGGGEFD RLAGLLNAAI AGLRENLSSP GQVKIMLHLA EGTKNDTFRW
WFDEITQRGV PFDVIGLSMY TYWDGPISSL KANMDDISQR YNKDVIVVEA AYGYTLANCD
NAENSFGEKE AAAGGYPATV QGQADFIRDL MQSVIDVPKK HGKGVFYWEL AWITPAGNTW
ATEAGMNYIN DHWKLGNARE NQALFNCQGE VLPSIKAFK
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