Gene Dd1591_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1275 
Symbol 
ID8118668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1444800 
End bp1445909 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content57% 
IMG OID644851669 
ProductABC transporter related 
Protein accessionYP_003003617 
Protein GI251788896 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00263306 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGCA TATGCTTAAA AAATGTCACC AAACGTTTTG GCAACACTGA AACGCTGCAC 
AATATCAATC TGGATATCCA GGCGGGTGAA TTCGCGGTGT TTGTCGGTCC CTCCGGCTGC
GGCAAATCGA CGTTGCTGCG GATGATCGCC GGTTTGGAGG AGATTAGCGA TGGCAAGATT
CTGATTGATG ACGACGTGAT GAATGACGTC GCACCTGCTC ACCGCGGCGT GGCGATGGTG
TTTCAGTCCT ACGCGCTCTA CCCGCACATG ACGGTGGCGG AAAATATGGG CTATGGGCTG
AAAGTCAACA AAGTACCGAA GGCGGAGATT CGCCATCAGG TCGAAATGGT TGCCAAAACC
TTACAACTTT CCCACCTGCT GGACCGCAAA CCGAAACAGC TGTCCGGCGG TCAACGCCAG
CGCGTCGCCA TCGGCCGCGC CATCGTGCGT AACCCGAAAG TGTTTATGTT CGACGAACCG
CTCTCCAACC TCGACGCCGA ACTGCGGGTC GATATGCGCC TGCACATCGC CAGGCTGCAT
CAGGAGCTGA AAACCACCAT GGTCTATGTC ACCCACGATC AGGTGGAAGC GATGACGCTG
GCCGACAAAA TCGTGGTGAT GAACAACGGC AAGGTGGAAC AGACCGGCTC GCCGATGGCG
CTGTACTACA ACCCAGTCAA CCGCTTCGTC GCCGGTTTTA TCGGCTCGCC CAAGATGAAC
TTTCTGCCCG CGACCGTCGT CGCCTGGCAG CCGCATCAGG TCACGCTGAC GCTGACGGCG
GAAAAAATGC TGACGCTGGA TATCGCTACC ACGCCGTTAC AGCCCGGCGA CGCCGTCACG
CTGGGGATAC GCCCCGAACA CCTCGGCATT CAGCCCTCGC ACCCGATTAC GCTGGATTTC
CAGTGTGAAG TGGTGGAACG ACTCGGCAAT AACACTTACC TGTTCGGCCA GTGCTACGGC
CACGACAGCT TTAAAATTCT GCTGCCCGGC GACGTACAAT TCCGCCCCTG GCAGGCGATT
ACAGTAGGTT TCGACGCACG CCACTGCATG ATTTTTGATG CAAACGGGCG GCGCGTCAGT
GCGGATATTC CGGTGCCGGG GCTGCACTAA
 
Protein sequence
MSSICLKNVT KRFGNTETLH NINLDIQAGE FAVFVGPSGC GKSTLLRMIA GLEEISDGKI 
LIDDDVMNDV APAHRGVAMV FQSYALYPHM TVAENMGYGL KVNKVPKAEI RHQVEMVAKT
LQLSHLLDRK PKQLSGGQRQ RVAIGRAIVR NPKVFMFDEP LSNLDAELRV DMRLHIARLH
QELKTTMVYV THDQVEAMTL ADKIVVMNNG KVEQTGSPMA LYYNPVNRFV AGFIGSPKMN
FLPATVVAWQ PHQVTLTLTA EKMLTLDIAT TPLQPGDAVT LGIRPEHLGI QPSHPITLDF
QCEVVERLGN NTYLFGQCYG HDSFKILLPG DVQFRPWQAI TVGFDARHCM IFDANGRRVS
ADIPVPGLH