Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1275 |
Symbol | |
ID | 8118668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 1444800 |
End bp | 1445909 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644851669 |
Product | ABC transporter related |
Protein accession | YP_003003617 |
Protein GI | 251788896 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00263306 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGCA TATGCTTAAA AAATGTCACC AAACGTTTTG GCAACACTGA AACGCTGCAC AATATCAATC TGGATATCCA GGCGGGTGAA TTCGCGGTGT TTGTCGGTCC CTCCGGCTGC GGCAAATCGA CGTTGCTGCG GATGATCGCC GGTTTGGAGG AGATTAGCGA TGGCAAGATT CTGATTGATG ACGACGTGAT GAATGACGTC GCACCTGCTC ACCGCGGCGT GGCGATGGTG TTTCAGTCCT ACGCGCTCTA CCCGCACATG ACGGTGGCGG AAAATATGGG CTATGGGCTG AAAGTCAACA AAGTACCGAA GGCGGAGATT CGCCATCAGG TCGAAATGGT TGCCAAAACC TTACAACTTT CCCACCTGCT GGACCGCAAA CCGAAACAGC TGTCCGGCGG TCAACGCCAG CGCGTCGCCA TCGGCCGCGC CATCGTGCGT AACCCGAAAG TGTTTATGTT CGACGAACCG CTCTCCAACC TCGACGCCGA ACTGCGGGTC GATATGCGCC TGCACATCGC CAGGCTGCAT CAGGAGCTGA AAACCACCAT GGTCTATGTC ACCCACGATC AGGTGGAAGC GATGACGCTG GCCGACAAAA TCGTGGTGAT GAACAACGGC AAGGTGGAAC AGACCGGCTC GCCGATGGCG CTGTACTACA ACCCAGTCAA CCGCTTCGTC GCCGGTTTTA TCGGCTCGCC CAAGATGAAC TTTCTGCCCG CGACCGTCGT CGCCTGGCAG CCGCATCAGG TCACGCTGAC GCTGACGGCG GAAAAAATGC TGACGCTGGA TATCGCTACC ACGCCGTTAC AGCCCGGCGA CGCCGTCACG CTGGGGATAC GCCCCGAACA CCTCGGCATT CAGCCCTCGC ACCCGATTAC GCTGGATTTC CAGTGTGAAG TGGTGGAACG ACTCGGCAAT AACACTTACC TGTTCGGCCA GTGCTACGGC CACGACAGCT TTAAAATTCT GCTGCCCGGC GACGTACAAT TCCGCCCCTG GCAGGCGATT ACAGTAGGTT TCGACGCACG CCACTGCATG ATTTTTGATG CAAACGGGCG GCGCGTCAGT GCGGATATTC CGGTGCCGGG GCTGCACTAA
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Protein sequence | MSSICLKNVT KRFGNTETLH NINLDIQAGE FAVFVGPSGC GKSTLLRMIA GLEEISDGKI LIDDDVMNDV APAHRGVAMV FQSYALYPHM TVAENMGYGL KVNKVPKAEI RHQVEMVAKT LQLSHLLDRK PKQLSGGQRQ RVAIGRAIVR NPKVFMFDEP LSNLDAELRV DMRLHIARLH QELKTTMVYV THDQVEAMTL ADKIVVMNNG KVEQTGSPMA LYYNPVNRFV AGFIGSPKMN FLPATVVAWQ PHQVTLTLTA EKMLTLDIAT TPLQPGDAVT LGIRPEHLGI QPSHPITLDF QCEVVERLGN NTYLFGQCYG HDSFKILLPG DVQFRPWQAI TVGFDARHCM IFDANGRRVS ADIPVPGLH
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