| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1268 |
|---|
| Symbol | |
|---|
| ID | 8118661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1436545 |
|---|
| End bp | 1437966 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644851662 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003003610 |
|---|
| Protein GI | 251788889 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG CACAAACGAC GTCTGTATCC GGCAAGACCG AAAGAGATAC CTCTGATTTG
GTTAAAGCGG CGATCTCCGG ATGGTTAGGC ACCGCGCTGG AATTTATGGA TTTTCAGTTG
TATTCGCTAG GGGCCGCATT AGTTTTTCAT GAAATCTTTT TCCCTGAACA ATCGGCCGCC
ATGGCGTTAA TTCTGGCGAT GGGGACTTAC GGTGCAGGTT ATATCGCCCG TATTATCGGT
GCCGTGGTGT TCGGCAGAAT GGGCGATTCC ATCGGCAGGA AAAAGGTGTT GTTTATTACC
ATCACGATGA TGGGGATCTG TACCACACTG ATTGGCGTCT TACCCACCTA TGCGCAAATC
GGCATTTTCG CGCCGCTGCT GCTGGTCACG TTGCGTATCG TGCAGGGGCT GGGCGCCGGC
GCGGAAATTT CCGGTGCCGG CACCATGCTG GCGGAATATG CGCCCAGCGG GAAGCGCGGC
ATTATCTCTT CGCTGGTTGC TATGGGCACC AACTGCGGTA CGCTGAGCGC CACCGGCATC
TGGGCCGCCA TGTTTTTCCT GCTCGACAGA GAGCAGTTGT TAGCCTGGGG CTGGCGTATT
CCGTTCCTGG CCAGCGCCAT TGTGATGGTT TTCGCCATCT GGCTGCGTAT GAACCTGAAA
GAAAGCCCGG TATTTGAACA GGTCAGCGAC ACCGCCGTCG ACACAGCGAA AGCGAATAAT
CCTCGGGCAA GCCAGCACAA ATCTCTGACG GAAATGTTCA GCAGTAAATC ATTCTGGCTG
GCGACCGGGT TGCGTTTTGG TCAGGCCGGT AATTCCGGAT TGATTCAAAC GTTTCTGGCC
GGTTATCTGG TACAAAGTTT GTTATTTGAA AAACGTATTC CGACCGATGC ACTCATGCTC
AGTTCGATTA TCGGTTTTAT GACGATTCCG CTATTAGGCT GGTTGTCGGA TAAATTCGGC
CGTCGTCTGC CTTATATTAT TCTGAATATT TCCGCCATCT TGCTGGCCTA CCCGATGTTG
TCGATTATCG TCAATAAAGA GATGGGAGTC AGTACGATTA TTGCCGCCAT TATCATTATT
CATAATATTG CGGTGTTGGG ACTGTTCGCG CTGGAAAATA TCACCATCGC CGAGCTGTTC
GGATCACGAA ATCGCTTTAC ACAAATGGCC ATCGCCAAAG AAGCCGGCGG TTTAATCGCC
GTCGGGTTAG GCCCGGTATT GGCAGGTATT TTCTGTAATA TGGCCGGTTC CTGGTGGCCG
ATTGTCGTGA TGCTGGTGAC CTATTCCTGC ATTGGGCTCA TTACCGCCCT CGCGATGCCG
GAAGTCAAAG ATCGTGATTT GAGCGTGCCG GAAGACGCCA CCGATACTCA GGCTGCGCGC
CACGCGACGG CCTCATCACA CCGCCAATAC AAGGGGCTTT AA
|
|---|
| Protein sequence | MNKAQTTSVS GKTERDTSDL VKAAISGWLG TALEFMDFQL YSLGAALVFH EIFFPEQSAA
MALILAMGTY GAGYIARIIG AVVFGRMGDS IGRKKVLFIT ITMMGICTTL IGVLPTYAQI
GIFAPLLLVT LRIVQGLGAG AEISGAGTML AEYAPSGKRG IISSLVAMGT NCGTLSATGI
WAAMFFLLDR EQLLAWGWRI PFLASAIVMV FAIWLRMNLK ESPVFEQVSD TAVDTAKANN
PRASQHKSLT EMFSSKSFWL ATGLRFGQAG NSGLIQTFLA GYLVQSLLFE KRIPTDALML
SSIIGFMTIP LLGWLSDKFG RRLPYIILNI SAILLAYPML SIIVNKEMGV STIIAAIIII
HNIAVLGLFA LENITIAELF GSRNRFTQMA IAKEAGGLIA VGLGPVLAGI FCNMAGSWWP
IVVMLVTYSC IGLITALAMP EVKDRDLSVP EDATDTQAAR HATASSHRQY KGL
|
|---|
| |