Gene Dd1591_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1264 
Symbol 
ID8118657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1430453 
End bp1432009 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content66% 
IMG OID644851658 
Producthistidine ammonia-lyase 
Protein accessionYP_003003606 
Protein GI251788885 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAA CCCGAAGCTA TTGCCTGACG CCCGGCGCAG TGGATCTCGC CACGCTGCGT 
GCTATTTATC GGGGAAACGT CGCTCTGACG CTGGCGGAAC AGGCGCGCGC GGCGGTGGCG
GCGGCGCAGG AAACGGTGCA GCGCATTGTG CGTCAGGACC GGGTGGTCTA TGGCATCAAC
ACCGGTTTCG GCAAGCTGGC CCAGACCCGC ATTCCGGCCG ACCGGCTGGC GGAGCTACAG
CGTAATCTGG TGCTGTCTCA CAGCGTCGGC ATCGGCGATC TGCTGCCGGA TGATGTGGTG
CGTCTGGTGA TGGCGACCAA GGTGATCAGT CTGGCGCGCG GCCACTCCGG GGTGAGGTTG
CAGGTCATCG ACACGCTGCT GGCGCTGTTC AACGCCGGCG TGATGCCTTG TATCCCGGAG
AAAGGATCGG TGGGCGCCAG CGGTGATCTG GCGCCGCTGG CGCATTTATC GCTGCTGCTG
TTGGGCGAAG GGCTGGCGCG GGTCGATGGT GAGCTTATCC CGGCGGCCGA CGGGCTGGCG
CGGGCGGGCG TTGAACCGCT GGTGCTGGGG CCGAAAGAGG GGCTGGCGCT GCTCAACGGC
ACGCAGGTCT CCACCGCGCT GGCGCTGCGC GGGTTGTTCG AGGCCGAAAA CGTGTTTGCC
GCCGGATTGG TGGCCGGTGC GTTGTCGCTG GAGGCAGTCA AAGGCTCGGT GAAGCCGTTC
GATGCCCGTA TCCATCAGGC GCGCGGCCAG CGGGGGCAGA TGGCGGTAGC GGCGGCGGTC
AGCGCCTTGT TGGCGGACAG CGAGATTTTA CAGTCACACG CCCACTGTGG CCGGGTGCAG
GACCCGTACT CGATTCGTTG CGTGCCGCAG GTGATGGGCG CGTGTCTGGA TAATTTGCAG
CACGCCGCCC GCGTGCTGGG CATCGAAGCC AACGCCGCGT CGGATAATCC GCTGGTGTTT
CCGGAAACCG ACGAGGTGAT CTCCGGCGGC AATTTCCACG CTGAGCCGGT GGCGTTCGCC
GCCGACATCA TCGCGCTGGC GGTGGCGGAA ATCGGCGCCA TTTCCGAGCG GCGCATGGCG
CTGCTGCTCG ACAGCACGCT GTCCGGGCTG CCGCCGTTTC TGGTTACCGA CGGCGGCGTC
AACTCCGGTT TTATGATTGC CCAGGTCACT GCCGCCGCGC TGGCGTCGGA AAACAAGTCG
CTGGCTCACC CCGGCAGCGT CGACAGCCTG CCGACCTCCG CCAATCAGGA AGACCATGTC
TCGATGGCGA CCTACGCCGC CCGCCGGCTC GGCAGCATGT GCTTTAACAC CGCCGCCGTG
GTGGGGATTG AAGCGATGGC CGCCGCGCAG GGTATCGACT TCCATCGCCC ACTGAAAAGC
TCGCCGTTGC TGGAGCGCGA ACTGGCGCAG GTGCGTGAAC AGGTAGCGTT TCTGGACCAC
GACCGCCTGA TGGCCACCGA TATTGATCTG ATGCGCCGGT GGGCCGGCCG TGAGCGCTGG
CCGTCCGTCA TCACCGCATT GTTACCCAGT TATGCCGTTG AACCGGCTTC TGTTTGA
 
Protein sequence
MSQTRSYCLT PGAVDLATLR AIYRGNVALT LAEQARAAVA AAQETVQRIV RQDRVVYGIN 
TGFGKLAQTR IPADRLAELQ RNLVLSHSVG IGDLLPDDVV RLVMATKVIS LARGHSGVRL
QVIDTLLALF NAGVMPCIPE KGSVGASGDL APLAHLSLLL LGEGLARVDG ELIPAADGLA
RAGVEPLVLG PKEGLALLNG TQVSTALALR GLFEAENVFA AGLVAGALSL EAVKGSVKPF
DARIHQARGQ RGQMAVAAAV SALLADSEIL QSHAHCGRVQ DPYSIRCVPQ VMGACLDNLQ
HAARVLGIEA NAASDNPLVF PETDEVISGG NFHAEPVAFA ADIIALAVAE IGAISERRMA
LLLDSTLSGL PPFLVTDGGV NSGFMIAQVT AAALASENKS LAHPGSVDSL PTSANQEDHV
SMATYAARRL GSMCFNTAAV VGIEAMAAAQ GIDFHRPLKS SPLLERELAQ VREQVAFLDH
DRLMATDIDL MRRWAGRERW PSVITALLPS YAVEPASV