Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1261 |
Symbol | |
ID | 8118654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 1428098 |
End bp | 1428841 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644851656 |
Product | transcriptional regulator, histidine utilization repressor, GntR family |
Protein accession | YP_003003604 |
Protein GI | 251788883 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCGACC TGCAAACCGC TTCCCAACTC GCTGCCGCGA TGAGCGATAC CCCTGCGCCA ATCTACCAGC GGGTCAAACA GGCCATTATC AGCCAGATTC GCAGCGGCGC CTGGCAACCG CATCAGCGAG TACCGTCGGA AAGCGAGCTG GTCAACGAAC TGGGCGTCAG CCGGATGACC ATCAACCGGG CGTTGCGGGA GCTGACCAGC GAAGGGTTTC TGGTACGGAT GCAGGGTGTA GGGACTTTTG TAGCGGAACA GAAAGCGCAT ACCGCCATGC TGGAAGTGCA CAACATCGCC GATGAAATCG CCGCCCGTGG TCATCGCCAC AGCAGCCGGG TGCTGGTGCT GGAAACCCTC AGCGCCGATG CCGATCACGC CGCGCAACTG GACATCGCCC CCGGCCAACC GCTGTTCCAT TCACAAATCG TGCATTATGA AAACGATGTG CCGGTACAAC TGGAAATTCG TTACGTCAAC CCGCAGGTGG CGCCGGACTA CCTGCAGCAG GATTTTACCC TTGATACGCC GCACAGCTAC CTGAGCCGCG TCGCGCCGCT GACCGCCGGC GAGCACCGGG TGGAAGCGGT CGCCGCCGAA CCGCACCAGC GCAACCTGCT GGCGCTGGGC GAACAGGAAC CCTGCCTGTT GATTCGCCGC CGCACCTGGC ACGGCTCGCG GGTCGTCACC GCCGCGCGTC TGTTTTACCC CGGCTCCCGT TATCAGCTAT TCGGGCGTTT CTGA
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Protein sequence | MTDLQTASQL AAAMSDTPAP IYQRVKQAII SQIRSGAWQP HQRVPSESEL VNELGVSRMT INRALRELTS EGFLVRMQGV GTFVAEQKAH TAMLEVHNIA DEIAARGHRH SSRVLVLETL SADADHAAQL DIAPGQPLFH SQIVHYENDV PVQLEIRYVN PQVAPDYLQQ DFTLDTPHSY LSRVAPLTAG EHRVEAVAAE PHQRNLLALG EQEPCLLIRR RTWHGSRVVT AARLFYPGSR YQLFGRF
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