Gene Dd1591_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1230 
Symbol 
ID8118783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1394914 
End bp1395438 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content53% 
IMG OID644851626 
Productisochorismatase hydrolase 
Protein accessionYP_003003574 
Protein GI251788853 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTGT TAATCGTCGT CGATATGCAA AACGGTGTGT TCGCCACGCC GCGTTATCAG 
CAGGACATCG TGGTTGAGCG CATCAATCGG TTAATTGATG CGGCGGATCA GACCATTTTT
ATTCAGCATA CGGATGCAGA CATGCCGCCC GGCAGTGAAG CATGGCAGTT ATTGCCCGCA
CTGCATCGCC CCGTGAATGC TATTTCCGTC ACTAAAACGG CTTGCGATGC GTTTTACCGT
ACCGAATTGG CCGAAATATT AAGCCGCCTA CATGTTCAAC ATTTCACACT ATGCGGTTGC
GCCACTGATT ATTGCGTCGA TGCTACCATC AAAAACGCCG CCAGCCGGGG GTATGCTCAG
ACGGTAGCAG GAGATGCCCA TACCACGGCG GACCGCCGGG CGGTGAGCGC CGCGCAACTG
ATCGCCCAGC ATAATGATGT CTGGCGTGAT TTCATTATTC CCGGCAATAC CTTACTGGTG
AAAGATACCG AAGTTATCTT GCAGGCGTGG CAAACGCTAG CCTGA
 
Protein sequence
MQVLIVVDMQ NGVFATPRYQ QDIVVERINR LIDAADQTIF IQHTDADMPP GSEAWQLLPA 
LHRPVNAISV TKTACDAFYR TELAEILSRL HVQHFTLCGC ATDYCVDATI KNAASRGYAQ
TVAGDAHTTA DRRAVSAAQL IAQHNDVWRD FIIPGNTLLV KDTEVILQAW QTLA