Gene Dd1591_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1221 
Symbol 
ID8118773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1388477 
End bp1389136 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content56% 
IMG OID644851618 
Productprotein of unknown function UPF0005 
Protein accessionYP_003003567 
Protein GI251788846 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCGTA TTATTGCCTC TTCCACTCGC GAGCAGTCGC TGCTCAGTAC CCATAAGGTA 
CTTCGTAATA CTTATTTCCT GCTGTCGCTG ACGCTGGGTT TTTCCGCCGT CACCGCCACC
CTGAGTACGG TGCTGAATCT GCCGTCTCCC GGCCTGATTC TGACGTTGGT CGGCTTTTAC
GGCCTGATGT TCCTGACCTA CCGTCTGGCA GACCGCCCGG CAGGGATTCT GGCGGCATTC
GCGCTGACCG GTTTTATGGG TTATACCCTC GGCCCGCTGC TGAGTTCGTT GATCGCCGCA
GGCGCCAGCG ACATTATCAT GTTGGCATTG GGCGGCACGG CGCTGGTGTT CTTCTGCTGT
TCCGCTTATG TGCTGACTAC CCGTAAGGAC ATGTCTTTCC TGTCCGGTAT GCTGATGGCA
GGTTTTGTGG TGTTGCTGGT CGCAACCATT GCCAACCTGT TCCTGAATCT GCCGGGGCTG
CATTTGGCGA TTAGCGCAAT GTTTATCCTG TTCTCCGCCG GCGCCATTCT GTGGGAAACC
AGCAACATCA TCCATAGCGG AGAAACCAAC TACATTCGTG CGACGGTCAG CTTGTATGTT
TCCATCTACA ACCTGTTTGT CAGCCTCCTG AGTCTGCTGG GCATGTCGCG CAGCGAGTAA
 
Protein sequence
MDRIIASSTR EQSLLSTHKV LRNTYFLLSL TLGFSAVTAT LSTVLNLPSP GLILTLVGFY 
GLMFLTYRLA DRPAGILAAF ALTGFMGYTL GPLLSSLIAA GASDIIMLAL GGTALVFFCC
SAYVLTTRKD MSFLSGMLMA GFVVLLVATI ANLFLNLPGL HLAISAMFIL FSAGAILWET
SNIIHSGETN YIRATVSLYV SIYNLFVSLL SLLGMSRSE