Gene Dd1591_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1207 
Symbol 
ID8118759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1374560 
End bp1375741 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content52% 
IMG OID644851604 
Productnucleoside transporter 
Protein accessionYP_003003553 
Protein GI251788832 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00208272 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAACA TTCTGCAATT TATCCTGGCC CTGATTGTTG TCGCCGGCCT GTCACTGCTG 
GTGTGCCGCG ATCGCAAAAG CATTCGCGTC AGGTATATTG TTCAACTTTT AGTCATTGAA
ATCCTGCTCG CTTATTTCTT TCTTTACTCC AGTGCAGGTC TCGGTTTCGT AACAGGGTTT
GCCGGTCTGT TTGACAAGCT GCTCGGTTTC GCCGGTGAAG GTACAACCTT CGTCTTTGGC
AATATTGGCA ACAATAGCTT TGTGTTCTTC CTGAAAGTAC TGTGCCCGAT TGTATTCATC
TCCGCGCTGA TCGGGATTTT GCAGCACATC AAAGTGCTGC CGTTCATTAT CCGGCTGATC
GGTACCATCC TGTCCAAAGT CAACGGCATG GGTAAGTTGG AGTCGTTTAA CGCCGTCAGT
TCGCTGATTC TGGGCCAGTC TGAAAACTTC ATTGCGTATA AAGACATTCT CGGACAGATG
TCTGAAAAAC GCATGTACAC CATGGCGGCC ACCGCGATGT CGACCGTCTC CATGTCGATC
GTCGGCGCTT ACATGTCAAT GCTGGACGCC AAATACGTCG TAGCGGCACT GGTGCTTAAC
ATGTTCAGTA CCTTTATCGT GCTGTCGCTC ATCAACCCGT ACGACACCAA TGAAGAGAAA
GAGCTGCACC TGAGCAATCT GCATGAAGGT CAAAGCTTTT TTGAAATGCT GGGCGAGTAC
ATCCTGGCCG GTTTCAAAGT TGCGGTTATC GTTGCTGCGA TGTTGATCGG TTTCATCGCA
TTGATCGCCG CTATCAACGC GCTGTTCAGC GCTGTATTCG GGCTGAGCTT CCAGGAAATC
CTGGGTTACG TGTTCTATCC GTTTGCCTGG ATAATGGGGA TCCCCAAAGC CGAAGCGCTG
CAAGTGGGCA GTATTATGGC CACCAAACTG GTGTCCAACG AATTCGTCGC CATGATGGAA
TTGCAGAAAG TGGCCGGTCA GTTGTCCCCG CGCAGCGTGG GTATTCTGTC GGTGTTCCTG
GTGTCTTTCG CCAACTTCTC CTCGATCGGT ATCGTCGCCG GGGCCATCAA GGGGCTGAAC
GAAGCACAGG GCAACACCGT TTCCCGTTTT GGTCTGAAGC TGGTTTATGG TTCAACGCTG
GTCAGCTTGC TGTCCGCCGC CGTTGCCGGT CTGGTGCTGT AA
 
Protein sequence
MSNILQFILA LIVVAGLSLL VCRDRKSIRV RYIVQLLVIE ILLAYFFLYS SAGLGFVTGF 
AGLFDKLLGF AGEGTTFVFG NIGNNSFVFF LKVLCPIVFI SALIGILQHI KVLPFIIRLI
GTILSKVNGM GKLESFNAVS SLILGQSENF IAYKDILGQM SEKRMYTMAA TAMSTVSMSI
VGAYMSMLDA KYVVAALVLN MFSTFIVLSL INPYDTNEEK ELHLSNLHEG QSFFEMLGEY
ILAGFKVAVI VAAMLIGFIA LIAAINALFS AVFGLSFQEI LGYVFYPFAW IMGIPKAEAL
QVGSIMATKL VSNEFVAMME LQKVAGQLSP RSVGILSVFL VSFANFSSIG IVAGAIKGLN
EAQGNTVSRF GLKLVYGSTL VSLLSAAVAG LVL