Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1203 |
Symbol | |
ID | 8118755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 1365367 |
End bp | 1366770 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644851600 |
Product | multidrug efflux system protein MdtE |
Protein accession | YP_003003549 |
Protein GI | 251788828 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.128409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCATC AGCCTGCATC CGTTCGCTGG CAATTGTGGA TTGTGGCCTT CGGCTTTTTT ATGCAAGCGC TGGACACCAC GATCGTTAAC ACCGCCCTGC CCTCTATGGC CGCCAGCCTG AATGAAAGCC CGCTGCGTAT GCATGTTGTG ATCGTCGCTT ATGTGCTGAC CGTCGCCATG TTGTTGCCGG CCAGCGGCTG GCTGGCCGAT AGGCTGGGTG TGCGCAATAT TTTCTTTTCC GCCATCATGT TGTTCAGCCT CGGTTCACTG CTGTGCGCCC GCTCCACCAC CCTCAATGAA CTGCTGTTTT CCCGGGTGAT TCAGGGCGTC GGCGGTGCGA TGATGGTGCC GATAGGTCGG CTGACGGTGA TGAAGCTGGT GCCGCGAGCT CAGTACATGG CTGCAATGAC CTTCGTTACG CTGCCGGGGC AGATAGGCCC GCTGATGGGG CCGACGCTCG GCGGTTTTCT GGTGCAATAC GCCAGTTGGC ACTGGATCTT CCTGATCAAT CTTCCGGTCG GGTTGATAGG CGCGCTCGCC ACCTGGCGGT TAATGCCCAA CTTCACCATG CCGCCGCGCC GTTTCGACCT GCGGGGTTTT ATCTGCCTGG TGATCGCGAT GGGCACGCTG ACGCTGGCGC TGGACGGGCA GAAAAGCCTT GGGTTTTCCG CGCCGGCGCT GATCGCGCTG GTGCTGACCG GCATGTTGGC GCTGCTGGGT TACTGGTGGA ATGCCAGGAA CAACGAGGCA TCGCTGTTTA ACCTGCGCCT GTTCCACACC CGCAGCTTTA CCATCGGATT GTTAGGCGGC TGGCTGGCGC GCATCGGCAG CGGTATGCTG CCGTTCATGA CGCCGGTATT TCTGCAAATC GGGCTGGGGT ACACCCCGTT TCATGCCGGT ATGATGATGA TCCCGCTGGT GCTGGGCAAC ATGGGGATGA AGCGGCTGGT GGTGCTGACC GTCAACCGGT TCGGCTACCG TATCGTGTTG ATCGCCTCAA CGCTGACGCT GGCGCTGGCT ACCTTGCTGT TTGCGCTGGT CGCGCTGATG AACTGGCACT GGATGACGCC GTTAGTGTTA CTGTTGGTGG GGATGGTCAA CGGTATCCGT TTTTCGACCA TGAATACCCT GACGCTCAAA GATTTGCCCG ATTCCCTGGC CAGTGGCGGC AACAGCCTGA TGTCGATGTC GATGCAGCTC TCGACCAGTA TGGGCGTGAC CATCGCCGGC TTGCTGCTGG GCATTTTCGC CAATCAGCAT CTGGTGAGCG GCGCGCCGGA AACCCACCGC GTGTTCCTTT ACACCTATCT CTGCATGGTG GCGGTGATGG CGCTCCCGGC GTTGATTTTC AACCGGGTGC CGCCCGATAC CGCTCAGCAG GCGACGCTGA CACGTTCCTC ATGA
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Protein sequence | MTHQPASVRW QLWIVAFGFF MQALDTTIVN TALPSMAASL NESPLRMHVV IVAYVLTVAM LLPASGWLAD RLGVRNIFFS AIMLFSLGSL LCARSTTLNE LLFSRVIQGV GGAMMVPIGR LTVMKLVPRA QYMAAMTFVT LPGQIGPLMG PTLGGFLVQY ASWHWIFLIN LPVGLIGALA TWRLMPNFTM PPRRFDLRGF ICLVIAMGTL TLALDGQKSL GFSAPALIAL VLTGMLALLG YWWNARNNEA SLFNLRLFHT RSFTIGLLGG WLARIGSGML PFMTPVFLQI GLGYTPFHAG MMMIPLVLGN MGMKRLVVLT VNRFGYRIVL IASTLTLALA TLLFALVALM NWHWMTPLVL LLVGMVNGIR FSTMNTLTLK DLPDSLASGG NSLMSMSMQL STSMGVTIAG LLLGIFANQH LVSGAPETHR VFLYTYLCMV AVMALPALIF NRVPPDTAQQ ATLTRSS
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