| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1191 |
|---|
| Symbol | |
|---|
| ID | 8118743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1351816 |
|---|
| End bp | 1352619 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644851588 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_003003537 |
|---|
| Protein GI | 251788816 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.16328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA TCAACGCGCT GACCATCGCC GGCACCGACC CGAGCGGCGG CGCCGGTATT
CAGGCCGACC TTAAAACCTT CTCGGCGTTG GGCGCTTATG GCACCAGCGT CATCACCGCG
CTGGTGGCGC AGAATACACG CGGCGTGCAG TCGGTTTATC GCATTGAACC GACGTTTGTC
GCCGCCCAGC TGGATTCAGT GCTGAGTGAT GTACGCATTG ATAGCGCCAA AATCGGCATG
TTAGCGCAGA CGGATATTGT GGAAGCGGTG GCGGACAGGC TACAGCGCTA TTCGTTGCCG
TATGTGGTGC TGGACACGGT GATGCTGGCG AAAAGCGGCG ATCCGTTGCT GGCGCCGGAA
GCGGTAGAGG CGGTACGCCA GCTACTGTTG CCGCGGGTGT CGCTGATCAC CCCCAATCTG
CCGGAGGCGG CGGCGCTGTT GCAGTGCTCG CCCGCCGACG ATGAGCGGGG TATGCGCCGG
CAGGGGGACG CATTACTGGC GATGGGGTGC CGGGCGGTGC TGATGAAAGG CGGCCATCTA
AGCGACAGCG AAAGTCCGGA CTGGCTATTC ATGCCGGATG CGGAGCCGGT GCGGTTAAGC
GCGCCGCGCG TCAATACCCG GCATACGCAC GGTACTGGCT GCACGCTGTC GGCGGCGCTG
GCGGCGTTAC GCCCGCGTTA TGACAACTGG CCGGATACGC TGTCCGCCGC ACGGGCCTAT
CTACAAGGGG CGCTGGAACA GGCGGATTCG CTGGAAGTCG GCCACGGTAT CGGCCCGGTG
CACCATTTTC ACCGCTGGTG GTGA
|
|---|
| Protein sequence | MKRINALTIA GTDPSGGAGI QADLKTFSAL GAYGTSVITA LVAQNTRGVQ SVYRIEPTFV
AAQLDSVLSD VRIDSAKIGM LAQTDIVEAV ADRLQRYSLP YVVLDTVMLA KSGDPLLAPE
AVEAVRQLLL PRVSLITPNL PEAAALLQCS PADDERGMRR QGDALLAMGC RAVLMKGGHL
SDSESPDWLF MPDAEPVRLS APRVNTRHTH GTGCTLSAAL AALRPRYDNW PDTLSAARAY
LQGALEQADS LEVGHGIGPV HHFHRWW
|
|---|
| |