Gene Dd1591_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1145 
Symbol 
ID8118297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1314635 
End bp1315798 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content63% 
IMG OID644851545 
ProductP-type conjugative transfer protein TrbL 
Protein accessionYP_003003494 
Protein GI251788773 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3846] Type IV secretory pathway, TrbL components 
TIGRFAM ID[TIGR02783] P-type conjugative transfer protein TrbL 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATG TGTCGGTGAT TGACCGCTTC CTCGATACCT TTTCGACCTA CATCGACTCC 
GGGTTTGGGC TGGTGCGCGG TGAAGTCTCC TTTCTGACCG CCACGCTGGT GGCGATCGAC
ATGACGCTGG CGGGGTTGTA CTGGGCGCTG TCGCAGGCGG GCGGGCAGGG AGAGGATGTG
ATGGCACGGC TGATCCGCAA GGTGCTCTAT GTCGGCGCGT TTGCTTACAT ACTCAACAAC
TTCAACGGGC TGTCGGGAAT AGTGTTTCGC TCATTTGCCG GGCTGGGTCT GCAGGCCGGT
GGTGCGGCGC TGAGTCTGGC TACGTTTCTG CAGCCCGGGC GGTTAGCCAA AACCGGTATA
GAGACGGCTG CCCCTCTGCT GCATCAAATC GACCGCCTGA GTGGTTTCCC TGATGTGTTT
ATCAATATTG TGCCCGTCAC CGTCATGCTG CTGGCCTGGT TGGTGGTGGT CCTGAGTTTC
TTCGCGCTGG CGATACAACT GTTCGTCACG TTGGTGGAGT TCAGGCTGAC CACACTGGCG
GGGTTTGTGT TGGTGCCGTT CGCACTGTGG AACAAGACGG CGTTTCTGGC AGAGAAAGTG
CTGGGCAATG TGGTGGCTTC CGGTGTGAAG GTGCTGGTAC TGGCGGTGAT CGTGGGGATC
GGCACCGGTC TGTTCGGTTC GCTGACCCTG AACCCGGATG ACCCTTCGCT GGATCAGGCG
CTGGTCGCCA TGCTGGCGTC GCTTGCACTG TTGGCACTGG GGATTTTCGG ACCGGGAATT
GCCACCGGGT TGGTGAGCGG CGCGCCGCAA TTGGGAGCCG GAACATTGGC CGGAACGGCA
TTGGGAGTGG CCGGCGTCGC GGCGGGAACC AGCGCGCTGG CGGGGCGGAT AGGCAGTGCG
GTGGGAGCCG GGGCACGTCT GCTGCCGTCG GCGTTACGCG GGCCACAAGC CAATACGACC
TCGTCGGCTA CCGGACAGCC GGGGCGGGAG GTCGGTTCCT CTGGGTCATC AGCCGCGGCA
CAGCCGGACT GGGCGAAGCG GCTGTATCGC CGTCAGCAAC TGGCGCAAGT GGCGGGCACG
GTGGCGCATA CACTGCGCGG TGCAGAGCAC GGTGGCAGCA GCGGCGGCCC GACTCTGCGT
GAGTCCGACC GGGAAGGGGG CTGA
 
Protein sequence
MDDVSVIDRF LDTFSTYIDS GFGLVRGEVS FLTATLVAID MTLAGLYWAL SQAGGQGEDV 
MARLIRKVLY VGAFAYILNN FNGLSGIVFR SFAGLGLQAG GAALSLATFL QPGRLAKTGI
ETAAPLLHQI DRLSGFPDVF INIVPVTVML LAWLVVVLSF FALAIQLFVT LVEFRLTTLA
GFVLVPFALW NKTAFLAEKV LGNVVASGVK VLVLAVIVGI GTGLFGSLTL NPDDPSLDQA
LVAMLASLAL LALGIFGPGI ATGLVSGAPQ LGAGTLAGTA LGVAGVAAGT SALAGRIGSA
VGAGARLLPS ALRGPQANTT SSATGQPGRE VGSSGSSAAA QPDWAKRLYR RQQLAQVAGT
VAHTLRGAEH GGSSGGPTLR ESDREGG