Gene Dd1591_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1144 
Symbol 
ID8118296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1313904 
End bp1314635 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content62% 
IMG OID644851544 
Productconjugal transfer protein TrbJ 
Protein accessionYP_003003493 
Protein GI251788772 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5314] Conjugal transfer/entry exclusion protein 
TIGRFAM ID[TIGR02780] P-type conjugative transfer protein TrbJ 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG TGTGGCTTGT CATCCTGCTG GCGTTGCTGC CGCTGCGTCC AGCGCAGGCA 
CTGACGGTAT TTGATCCTGC CAACTATGCG CAGAACACGC TGAGCGCTGC CCGGGCATTG
GATCAGATCA ACAATCAGGT CATCCAGTTG CAGAACGAGG CGCAGATGCT GATTTATCAG
GCCCGCAACC TGACTCGTCT GCCATTCACG GTAACCGATC AACTGCGCAC CACGCTGGCG
GGCACAGACC GGTTGATTGC CCAGGCGCGT GGCCTGGCCT ATGAGGTGCA GCGCATGGAC
TCGGATTTTG CGCGGCTGTA CCCCGAACAG TATGCCACCA CGGTGGGCCA CGATCGCCTG
TATCAGGATG CCCGTACGCG CTGGGTCAAC ACGCTGGCAG GCTTGCATAC CGCTTTGCAG
ATGCAGGCAC AGATGGTGCA GAGCCTGTCG GCGGACGAAA GCACGCTGTC CGCGCTGGTC
GGGCAGAGCC AGGCGGCCAC CGGCGCCTTG CAGGCCATGC AGGCGACAAA CCAGTTGCTG
GCGTTGCAGG CGAAACAAAC GATGCAGGGC CAACAGCTCC AGTTGACGCA GGACCGGGCG
GTCGCGCTGG AGCTGGCGCG ACAGGCAGCA GCGATTGAAC GCGGCCGGGA AATCACGCGG
CGTTTTCTGG GCACGGGAAC CCCTTACACG CCGCAGCCGG TGAACTTTTA CGGTAAGGAC
GGCGGTGAGT GA
 
Protein sequence
MKTVWLVILL ALLPLRPAQA LTVFDPANYA QNTLSAARAL DQINNQVIQL QNEAQMLIYQ 
ARNLTRLPFT VTDQLRTTLA GTDRLIAQAR GLAYEVQRMD SDFARLYPEQ YATTVGHDRL
YQDARTRWVN TLAGLHTALQ MQAQMVQSLS ADESTLSALV GQSQAATGAL QAMQATNQLL
ALQAKQTMQG QQLQLTQDRA VALELARQAA AIERGREITR RFLGTGTPYT PQPVNFYGKD
GGE