Gene Dd1591_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1115 
Symbol 
ID8118267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1285778 
End bp1286956 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content53% 
IMG OID644851517 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_003003466 
Protein GI251788745 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGC AAACCGTATC TCCCGTCGTT GCTGTGTCCG ACGCTATCGC CGTTGCCGCC 
AATAGCAATG AAAAAATCAA CCTGTTGGAT TTCAATCGTC AGCAAATGCG CGCTTTTTTT
GCCGAACTGG GTGAAAAGCC GTTCCGCGCC GATCAGGTCA TGAAATGGAT CTATCATTAC
TGTTGTGATG ATTTTAATCA GATGACCGAC ATTAATAAGG TACTGCGCGG TAAGTTGCAG
GCGATCGCGG AGATTCGGGC GCCCGAAGTG GTGGATGAGC AACGCTCTTC CGATGGCACC
ATCAAGTGGG CGATTCTGGT TGACGGCCAG CGTGTGGAGA CGGTGTATAT TCCGGAAGAA
GATCGCGCCA CACTGTGCGT TTCTTCGCAG GTTGGTTGCG CGCTGGAGTG CAAATTCTGT
TCTACCGCGC AACAGGGTTT TAACCGCAAC CTGCGTGTAT CCGAAATTAT CGGGCAGGTA
TGGCGTGCGG CGAAAATCAT CGGCGCGGCT AAAGTGACGG GGCAGCGGCC TATCACCAAC
GTGGTGATGA TGGGGATGGG GGAACCGCTG CTGAACCTGA CCAATGTGGT GCCGGCGATG
GAAATCATGC TGGATGATTT TGGTTTCGGC TTGTCTAAAC GCCGCGTGAC GCTGTCAACG
TCCGGCGTAG TCCCTGCGCT GGATAAGTTG GGCGACATGA TCGACGTAGC GCTGGCGATT
TCCCTGCACG CGCCGACGGA TGAAATTCGT AACGAAATCA TGCCGATCAA TAAAAAGTAT
GATATAGAAA CCTTCCTGGC TGCGGTCCGT CGCTATCTGG ATAAGTCCAA CGCCAATCAG
GGGCGGGTGA CGGTGGAATA CGTGATGCTG GATCACATCA ACGACGGCAC CGAACATGCC
CATCAGTTAG CTGAATGCCT GAAAGATACG CCGTGTAAGA TTAACCTGAT CCCGTGGAAC
CCGTTCCCCG GCGCGCCTTA TGGCCGCAGC TCCAACAGCC GTGTCGATCG TTTTTCCAAG
GTACTGATGG AGTATGGTTT CACCACTATC GTGCGTAAGA CCCGTGGCGA TGATATCGAT
GCCGCTTGTG GTCAGTTGGC GGGTGAAGTG GTGGATCGTA CCAAGCGTAC GCTGAAGAAA
AAGATGCAAC GCGATACGAT TGCGGTAAAA ACCGTCTGA
 
Protein sequence
MSEQTVSPVV AVSDAIAVAA NSNEKINLLD FNRQQMRAFF AELGEKPFRA DQVMKWIYHY 
CCDDFNQMTD INKVLRGKLQ AIAEIRAPEV VDEQRSSDGT IKWAILVDGQ RVETVYIPEE
DRATLCVSSQ VGCALECKFC STAQQGFNRN LRVSEIIGQV WRAAKIIGAA KVTGQRPITN
VVMMGMGEPL LNLTNVVPAM EIMLDDFGFG LSKRRVTLST SGVVPALDKL GDMIDVALAI
SLHAPTDEIR NEIMPINKKY DIETFLAAVR RYLDKSNANQ GRVTVEYVML DHINDGTEHA
HQLAECLKDT PCKINLIPWN PFPGAPYGRS SNSRVDRFSK VLMEYGFTTI VRKTRGDDID
AACGQLAGEV VDRTKRTLKK KMQRDTIAVK TV