Gene Dd1591_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1103 
Symbol 
ID8118255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand+ 
Start bp1275626 
End bp1276120 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content57% 
IMG OID644851505 
ProductDNA-binding transcriptional regulator IscR 
Protein accessionYP_003003454 
Protein GI251788733 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00126529 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTGA CATCTAAAGG CCGCTACGCC GTTACCGCCA TGCTCGATGT GGCGCTGCAT 
TCAAAAGAAG GCCCGGTTCC GCTGGCGGAT ATCTCCGAGC GTCAGGGTAT TTCGCTTTCT 
TATCTGGAAC AGCTGTTCTC TCGCCTTCGC AAGCATGGTC TGGTTGCCAG TGTGCGTGGC 
CCGGGCGGCG GCTATCTGTT GGGGAAAGAC TCCGCCGAAA TCGCTGTCGG CTCAGTCATC 
TCTGCGGTGG ATGAATCCGT GGACGCTACC CGTTGCCAGG GGAAAGAAGG GTGTCAGGGC 
GGCGATCGTT GCCTGACCCA TACGCTGTGG CGCGATCTGA GCGACCGAAT CAGCGGGTTC 
CTCAACAACA TCACCCTGGA TGAACTGGTT AATAATAAAG AGATTCTGGA CGTCGCGGAT 
CGTCAGGATG CTGACGTGCG TCGTACCGCC AACGGACGCA TACAAGAAAC TATTAACGTC 
AACTTGCGTG CCTGA
 
Protein sequence
MRLTSKGRYA VTAMLDVALH SKEGPVPLAD ISERQGISLS YLEQLFSRLR KHGLVASVRG 
PGGGYLLGKD SAEIAVGSVI SAVDESVDAT RCQGKEGCQG GDRCLTHTLW RDLSDRISGF 
LNNITLDELV NNKEILDVAD RQDADVRRTA NGRIQETINV NLRA