| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1088 |
|---|
| Symbol | |
|---|
| ID | 8118240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1256599 |
|---|
| End bp | 1258254 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644851490 |
|---|
| Product | pectin acetylesterase |
|---|
| Protein accession | YP_003003439 |
|---|
| Protein GI | 251788718 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA CCACCTGGAA ACGCACGCTT TTTCTCGGTT CCCTACTGTG TCTGCCGATA
TCCTTCGCAC AGGCCGCAAA CACTGCGCCA GAATCCCCCG CGTCCCCTTC ACAGCCGATA
CTAAATGTCA CGACGCTGGG ACCAAACACC CTGATTAGCG GCCGGGTAGC GTATCGTGAT
ATACGTTTTC CCGCCACGTT GCTCATCAAG GATCAACGCG GCGTCGAACA CAGTGTAAAA
ACCGATATCC AGGGACGATT TTATGCAGAT GTCTCTTCAA TGGTCGCACC GCTGCGCCTG
TCAGCCGTTG AAGCCGGCGG GCAAAACTGC CTTGCCAGCA ATCAGTTGCG TGCGGTGTGC
CTGAGTGCAC TGGTTCCCCA ATTACGTGAT GGTCATGAAA ATCGTATTAA CATCAACCCG
TTGACCGATC GTATTTTATC CGATGTCGCT GCATCGGCCG GTTATATTGG CCCACAGCAA
CTGATCGACG CCACGACGCT GCCATCTTTA TCGACGGCAG CCTGGGAAAC CGCTTACCGT
GAATTCCATG CCGGCTTTGA CGATGCCTTA AAGCAGGCTG GTATTGCCGC CCCTTCGCAG
TTCGATCCGC TTACTTATCC TGATGTACTG ACGCCAGCCG TTACACAGAT GCTTCAGGTC
ATTAACCACG CCCGCAATTA CCACAATGAC AGCGGCCAGG CCGGTCATAC GGTACTGACG
GACATCGCAT TTCGCCCGAT TGTCGGGTTG AATGCCTCCG GCAGTTACGA GCCTCTGGAT
CTGACCAGCG CCAGCCAACA GCGTAAAGCG CTGGAGCAAG CGCGTACCCG TATTTTCATC
GTCAGCGACT CAACCGCGGC GACCTATGAA ACAGCACGTT TTCCGCGCAT GGGCTGGGGG
CAAGTATTTG CACAACAGCT CCGCCCGGAC AGCCATATTG CTGTCGTTAA CGGCGCCCGT
TCGGGGAGAA GCTCGCGGGA TTTCTACTAC GAAGGCTGGT TCCGCCAAAT GGAGCCGTTT
ATGCGTCCGG GCGATTACTT GTTTATCGGT ATGGGGCACA ATGATCAAAA CTGCGATAGC
CAGAAAGCGG TTCGCGGTGC TGCGGATGTC GCCAACCTTT GCACCTACCC CAATAGCGCT
GACGGTAAGC CGCAATACCC CCAGGGCAAA CCGGATATGT CTTTCCAGAT CTCACTGGAA
CGCTATATTC GTTACGCCCG GGCACATCGG ATGATCCCCG TATTATTGAC CCCGACTGCA
CGCGTCAAAA ATGCAGAAGG AAAGAACGGA ACACCGGCAG TCCACAGCCA TCTGACGAAG
CAAAACAAAG CCGGCGGTTA TGCGTTTATC GGCGATTACA CCCAGACCAT TCGTGATACG
GCCAGCAAAA ATAAGGTGCC GTTACTGGAT GTGGAAACGG CAACGTTGGC ACTGGCCAAT
CAGGGGGACG GACAACAATG GCAGCAATAC TGGCTGGCGG TTGATCCGGA ACTTTACCCT
TATTACCGCG ATCAGGCCGG CAGCCTGACT CAACCTGATA CCACCCACTT CCAGCAGAAA
GGCGCTCAAG CAGTCGCCGC GATAGTCGCT GACCAGATCA AGGCGACCCC CTCTTTGCGG
GAATTGGCAG GCAAGCTGCA AGCAACCACG CAGTAA
|
|---|
| Protein sequence | MKITTWKRTL FLGSLLCLPI SFAQAANTAP ESPASPSQPI LNVTTLGPNT LISGRVAYRD
IRFPATLLIK DQRGVEHSVK TDIQGRFYAD VSSMVAPLRL SAVEAGGQNC LASNQLRAVC
LSALVPQLRD GHENRININP LTDRILSDVA ASAGYIGPQQ LIDATTLPSL STAAWETAYR
EFHAGFDDAL KQAGIAAPSQ FDPLTYPDVL TPAVTQMLQV INHARNYHND SGQAGHTVLT
DIAFRPIVGL NASGSYEPLD LTSASQQRKA LEQARTRIFI VSDSTAATYE TARFPRMGWG
QVFAQQLRPD SHIAVVNGAR SGRSSRDFYY EGWFRQMEPF MRPGDYLFIG MGHNDQNCDS
QKAVRGAADV ANLCTYPNSA DGKPQYPQGK PDMSFQISLE RYIRYARAHR MIPVLLTPTA
RVKNAEGKNG TPAVHSHLTK QNKAGGYAFI GDYTQTIRDT ASKNKVPLLD VETATLALAN
QGDGQQWQQY WLAVDPELYP YYRDQAGSLT QPDTTHFQQK GAQAVAAIVA DQIKATPSLR
ELAGKLQATT Q
|
|---|
| |