Gene Dd1591_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1083 
Symbol 
ID8118235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1251368 
End bp1252801 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content52% 
IMG OID644851485 
Producthistidine kinase 
Protein accessionYP_003003434 
Protein GI251788713 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.92303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCGT TGAATCGTTG GCGTTTTTTT CCACGCTCCT TACGGCAACT GGTTGTTATG 
GCATTCCTGT TGGTCTTATT GCCGCTGTTG GTATTGGCTT ATCAGGCTTA TGAGAGTTTG
GATCACCTCA GCGAGCAGGC TGCCGGAATT AATAACACCA CGCTGGCTGA TGCAAGACGC
AGCGAGGCAA TGACCAGCAC CGCTATCAGC ATGGAACGCA GTTACCGTCA GTTTTGCGTA
CTGGGAGATC AAACACTCTC ACAGTTGTAT CAGAATCAAC GGAAGCAGTA TTCCCAGATG
CTGGACGCAC ATGCGCCGAT CTTGCCGGAC CCTTCCTATT ATCAAACCCT ACGGCAGTAC
CTGACTGAGC TGACCGATAT TCGATGCCAG AACAACGGCC CGGCCGCCGC ACCCATCGCC
GTACTGGACA ACTTCTCCCG CATGAATGCT CAGATGGTGC AGGCAACCCG TGAGGTGATC
TTTTCGCGTG GGCAACAATT GCAGCGAGAT ATTGCTGAAC GAGGCCGTTT CTTCGGCTGG
CAAGCGCTGG TGCTGTTCCT GGTTAGTGTG CTGTTGGTAA TGTTGTTCAC CCGGATGATT
ATCGGACCGG TAAAAGGCGT TGAGAGAATG ATCAATCGGC TGGGCGAAGG CCGTCCGTTA
GGCCGAATCG GCAGCTTCAG GGGGCCGACG GAGATTCGGT CTTTAGCGCA GCGGATCATC
TGGTTAAGCG AGCGTCTTTC CTGGCTGGAG GCGCAACGCC ACGAGTTTTT GCGCCATTTG
TCTCATGAGT TAAAAACACC ATTGGCAAGT TTGCGTGAAG GGGCGGCATT ACTGGCTGAT
GAAGTGGTTG GCTCGCTGAC GGACGACCAG AAAGAGGTGG TGGCGATTTT GGATAACAGT
AGCCGCCACT TACAGCAACT GATTGAACAA TTGCTCGACT ATAACCGAAA ACTGGCGGAT
GCGCCGACAG GGCTGGAGCA CGTCGACATC AGCGATATTG TCAACATGGT TGTAGCCGCA
CATAGCCTTC CTGCCCGCAG TAAATTGATG CAAACACATG TTGAACTGAA TGCGCAGGGC
TGCCGTGCGG AAACGACATT ACTGATGCGG GTGATGGATA ATCTCTATTC CAATGCGGTG
CACTATGGCC GGGAATCCGG TAACATTTGG ATCCGCAGTC GGCAGATTGA TAACCGGGTT
CAGATTGACG TCGCCAACAG TGGCACGCCT ATTCCTGAAT CGGACAAAAG TTTGATCTTC
GAGCCTTTTT ATCAAGGATC TCACCAGCGT AAAGGGGCAG TTAAAGGGAG TGGTCTGGGA
TTGAGCATTG CACAGGATTG CATCCGCCGT ATGCAAGGTG AGTTGAATCT GGTCTCGGTG
GACTATGCCG ATGTCTGCTT CCGTATTGAA TTACCATTAA ACGCTGAGAA TTAA
 
Protein sequence
MISLNRWRFF PRSLRQLVVM AFLLVLLPLL VLAYQAYESL DHLSEQAAGI NNTTLADARR 
SEAMTSTAIS MERSYRQFCV LGDQTLSQLY QNQRKQYSQM LDAHAPILPD PSYYQTLRQY
LTELTDIRCQ NNGPAAAPIA VLDNFSRMNA QMVQATREVI FSRGQQLQRD IAERGRFFGW
QALVLFLVSV LLVMLFTRMI IGPVKGVERM INRLGEGRPL GRIGSFRGPT EIRSLAQRII
WLSERLSWLE AQRHEFLRHL SHELKTPLAS LREGAALLAD EVVGSLTDDQ KEVVAILDNS
SRHLQQLIEQ LLDYNRKLAD APTGLEHVDI SDIVNMVVAA HSLPARSKLM QTHVELNAQG
CRAETTLLMR VMDNLYSNAV HYGRESGNIW IRSRQIDNRV QIDVANSGTP IPESDKSLIF
EPFYQGSHQR KGAVKGSGLG LSIAQDCIRR MQGELNLVSV DYADVCFRIE LPLNAEN