Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_1068 |
Symbol | rnc |
ID | 8120347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 1232299 |
End bp | 1232979 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644851470 |
Product | ribonuclease III |
Protein accession | YP_003003419 |
Protein GI | 251788698 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCCA TCCTGATAAA TCGTTTACAA AAAAAGCTGG GCTATACTTT CCAACAATAT GACCTTTTAT TACAGGCGCT GACTCACCGG AGCGCCAGTA GTAAACATAA CGAACGGCTG GAGTTCCTGG GGGATTCCAT CTTAAGTTTC GTTATCGCCA ATGCGTTGTA TCATCGCTTT CCTCGTGTGG ATGAGGGTGA TATGAGCCGG ATGCGTGCAA CTCTGGTACG CGGCAATACG CTGGCGGAAA TTGCCCGTGA GTTTGAATTG GGCGAATGCC TGCGCCTTGG TCCCGGCGAA TTGAAAAGCG GCGGCTTTCG CCGAGAGTCG ATTCTGGCGG ATACCGTAGA AGCCTTGATT GGCGGTGTCT TTCTGGACAG TAACATCCAG ACCGTCGAGC GGTTGATTCT GAGCTGGTAT CAGACTCGTC TGGATGAGAT AAGCCCAGGC GACAAACAAA AAGATCCGAA AACCCGCCTG CAAGAGTTCC TGCAGGGACG TCACTTACCA CTGCCAACCT ATCTGGTGGT GCAGGTACGT GGCGAGGCGC ACGATCAGGA ATTTACCATT CATTGCCAGG TCAGCGGGTT TAGCGAGCCG GTAGTGGGTA CTGGGTCAAG TCGTCGCAAG GCCGAGCAGG CTGCGGCGGA GCAGGCCCTG AAAAAGCTGG AGCTTGAATG A
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Protein sequence | MNPILINRLQ KKLGYTFQQY DLLLQALTHR SASSKHNERL EFLGDSILSF VIANALYHRF PRVDEGDMSR MRATLVRGNT LAEIAREFEL GECLRLGPGE LKSGGFRRES ILADTVEALI GGVFLDSNIQ TVERLILSWY QTRLDEISPG DKQKDPKTRL QEFLQGRHLP LPTYLVVQVR GEAHDQEFTI HCQVSGFSEP VVGTGSSRRK AEQAAAEQAL KKLELE
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