| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1059 |
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| Symbol | |
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| ID | 8120338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1222064 |
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| End bp | 1223416 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644851461 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_003003410 |
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| Protein GI | 251788689 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0187648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCGA CCAATTTTTC CGAGTTTGAT CTTGATGACA GCCTGCTTGA CGCCTTGCGC
GACATGGGCT TCAGCCGCCC GACCGCTATT CAGGCCGAGG CCATTCCCCC GGCAATGGAA
GGGCGAGATG TACTCGGCTC CGCACCGACC GGAACCGGTA AAACCGCAGC CTATCTGCTG
CCGGTTTTAC AGCACCTGCT GGATTTCCCA CGTAAAAAAT CCGGTCCGCC GCGGATTCTG
ATTCTGACAC CGACCCGGGA ACTGGCGATG CAGGTAGCGG ATCAGGCTCG GGCGATGGCC
GCGCATACCC ATCTGGACAT TGCGACCATC ACCGGCGGCG TGGCTTATAT GAATCACGCC
GAAGTATTTA GTGAAAATCA GGATGTGGTC GTCGCCACTA CCGGCCGTCT GTTGCAATAC
ATCAAAGAAG AGAATTTTGA CTGTCGCGCA GTAGAAACCC TGATTCTGGA TGAAGCCGAC
CGTATGTTGG ACATGGGGTT CGCTCAGGAC ATCGAGCATA TTGCCGGTGA AACCCGCTGG
CGCAAGCAAA CCATGCTGTT CTCCGCAACG CTGGAAGGCG ATGCTATTCA GGATTTTGCC
GAGCGCCTGT TGAATGACCC GATCACAATA GAAGCCGAGC CGTCGCGGCG TGAGCGTAAA
AAAATTCTGC AATGGTACTA TCGCGCTGAC GACATTCAGC ACAAGACAGC GCTACTCAGC
CACCTGCTTA AACAGCCGGA CGTCACCCGT TCGATCGTGT TCGTGCGCAA ACGCGAGCGA
GTGCATGAAC TGGTAGACTG GTTGCGCTCT GCCGGCATCG AATCCTGTTA TCTGGAAGGG
GAAATGGTGC AGGCTAAACG TAACGAAGCC ATCAAACGGT TGAGCGAAGG CCGGGTGAAA
GTGCTGGTTG CTACAGATGT CGCCGCACGC GGGCTGGATA TTCAGGACGT CAGCCACGTG
TTCAACTTCG ATTTACCTCG TACTTCCGAC GTTTATCTGC ATCGCATCGG GCGCACCGGG
CGGGCAGGCC GTAAAGGCTG CGCTATCTCG CTGGTCGAAG CGCATGACTA TCTGCTGCTT
GAAAAGGTCG GCCGTTATCT CAACGAGCCG TTGAAAGCGC GCGTCATCGA TGAATTACGC
CCGAGTACCC GCGCGCCAAG TCCCAAATCT AACGGTAAGC CATCGAAAAA AGTGCTGGCC
AAGCGCAAAG AGCAGAAAGA AAAAGAGAAA GAAAAGCAGA AGGCGAAGGT CAAAGTGCGT
CACCGCGACA GCAAAAATAT CGGCAAACGC CGTCAACCCA AAGCCAAAAC CCCGGCTGAA
CAGACGAAAG AAAAGCCGGT GGATAACAGC TGA
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| Protein sequence | MTATNFSEFD LDDSLLDALR DMGFSRPTAI QAEAIPPAME GRDVLGSAPT GTGKTAAYLL
PVLQHLLDFP RKKSGPPRIL ILTPTRELAM QVADQARAMA AHTHLDIATI TGGVAYMNHA
EVFSENQDVV VATTGRLLQY IKEENFDCRA VETLILDEAD RMLDMGFAQD IEHIAGETRW
RKQTMLFSAT LEGDAIQDFA ERLLNDPITI EAEPSRRERK KILQWYYRAD DIQHKTALLS
HLLKQPDVTR SIVFVRKRER VHELVDWLRS AGIESCYLEG EMVQAKRNEA IKRLSEGRVK
VLVATDVAAR GLDIQDVSHV FNFDLPRTSD VYLHRIGRTG RAGRKGCAIS LVEAHDYLLL
EKVGRYLNEP LKARVIDELR PSTRAPSPKS NGKPSKKVLA KRKEQKEKEK EKQKAKVKVR
HRDSKNIGKR RQPKAKTPAE QTKEKPVDNS
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