| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1053 |
|---|
| Symbol | |
|---|
| ID | 8120326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1215101 |
|---|
| End bp | 1215406 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644851449 |
|---|
| Product | phosphotransferase system lactose/cellobiose-specific IIB subunit |
|---|
| Protein accession | YP_003003404 |
|---|
| Protein GI | 251788683 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1440] Phosphotransferase system cellobiose-specific component IIB |
|---|
| TIGRFAM ID | [TIGR00853] PTS system, lactose/cellobiose family IIB component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.586285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TATTTCTTTG CTGTGCTGCG GGAATGTCAA CCAGTATGGT GATGAATAAA
ATGAAACAGG CAGCAGCAGA AAAAGGTATT GAGGTTCAGA TTGTTGCTGT ATCGATGGAT
GAGTTTGATA CACTCTTGCC ACAGTATGAT TGCTGCTTGT TGGGCCCTCA AATAAAATAT
AAATTTGAGG AGTTCAAGAA AAAGGCAGAT GCAGCCGGTA AAAAAATAGC TGTTATTAAT
AATATGGATT ATGGAATGAT GCGCGGCGAC AAAATTCTGG CTGAAGCATT AGCAATGTTT
GATTAA
|
|---|
| Protein sequence | MKKIFLCCAA GMSTSMVMNK MKQAAAEKGI EVQIVAVSMD EFDTLLPQYD CCLLGPQIKY
KFEEFKKKAD AAGKKIAVIN NMDYGMMRGD KILAEALAMF D
|
|---|
| |