Gene Dd1591_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1025 
Symbol 
ID8120298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1181133 
End bp1181903 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content52% 
IMG OID644851422 
ProductABC-2 type transporter 
Protein accessionYP_003003377 
Protein GI251788656 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0880893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGGT TATATTGGGT GGCGTTGCAG AGTATCTGGA TCAAAGAGGT CAATCGCTTC 
GCCCGGATCT GGATTCAGAC GCTGGTGCCG CCGGTGATCA CCATGTCGTT GTATTTCATT
ATTTTCGGCA ATCTGATTGG CAACCGAATC GGTGAAATGG CTGGTTTCAC CTACATGCAG
TTCATCGTGC CGGGGTTAAT CATGATGTCG GTGATTACTA ATGCCTACGC GAATGTCGCC
TCGTCATTTT TCAGCGCGAA ATTTCAGCGC AATATCGAAG AGCTGCTGGT CGCACCGGTG
CCGACGCATA TTATTATCGC CGGTTATGTC GGCGGCGGTG TGGCGCGGGG GATTTGCGTC
GGCGTACTGG TAACGGCGGT GTCGCTGTTT TTTGTGCCGT TGCAGGTTCA TGCGTGGTGG
ATGGTGGTGT TGACCTTGTT GCTGACGGCA ATGCTGTTTT CGCTGGCCGG ATTAGTCAAC
GCCGTATTTG CCAAAACCTT TGACGATATC AGCCTGATTC CCACCTTCGT GCTGACGCCG
TTGACCTATC TTGGCGGCGT GTTCTATTCG TTATCGTTGT TATCGCCATT CTGGCAGACG
GTGTCCAAGC TTAACCCGAT CGTTTATATG ATCAGCGGTT TCCGTTTTGG TTTTCTGGGT
ATTCATGACG TGCCGTTGCC ATTGACGCTG ATGGTGTTGC TGGCGTTTAT CGTCGCGTTC
TATGGATTGA GCTGGTGGCT GATAGAGCGG GGCCGCGGGT TACGCAGTTA A
 
Protein sequence
MMGLYWVALQ SIWIKEVNRF ARIWIQTLVP PVITMSLYFI IFGNLIGNRI GEMAGFTYMQ 
FIVPGLIMMS VITNAYANVA SSFFSAKFQR NIEELLVAPV PTHIIIAGYV GGGVARGICV
GVLVTAVSLF FVPLQVHAWW MVVLTLLLTA MLFSLAGLVN AVFAKTFDDI SLIPTFVLTP
LTYLGGVFYS LSLLSPFWQT VSKLNPIVYM ISGFRFGFLG IHDVPLPLTL MVLLAFIVAF
YGLSWWLIER GRGLRS