| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1016 |
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| Symbol | |
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| ID | 8120289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 1173321 |
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| End bp | 1174184 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644851413 |
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| Product | spermidine synthase |
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| Protein accession | YP_003003368 |
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| Protein GI | 251788647 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGGA AAGAAATTTG GTATGAAACC CTACATGCCA ACTTTGGTCA GTATTTTTCT
ATAGAAAAGG TGCTCTATCA TGAAAAAACC GACCATCAGG ATCTGATCAT CTTCGAAAAC
GCCGCACTGG GCCGGGTAAT GGCACTGGAT GGCGTAGTAC AGACCACCGA ACGAGACGAG
TTCATCTATC ACGAAATGAT GACCCATGTC CCGCTGCTGG CCCACGGCAA CGCCAAACGC
GTGCTGATTA TCGGCGGCGG CGACGGCGGT ATGCTGCGCG AGGTGTGCCG TCACCGTAAT
ATTGAACAGA TCACCATGGT GGAAATCGAC GCCGGCGTCG TGTCGTTCTG CCGCCAGTAT
CTGCCGAATC ACAGCGCCGG CGCTTACGAT GACCCGCGTT TTCGTCTGGT GATTGACGAT
GGTGTTAACT TCGTCAACGC CTGTCAGGAA AAGTTCGATA TCATCATTTC CGACTGTACC
GACCCTATCG GACCCGGTGA AAGTTTGTTC ACCTCGGATT TTTACCAGGG ATGCGCTCGC
TGCCTGAACG ACGGGGGCGT CTTTGTGGCG CAAAACGGCG TCTGCTTCCT GCAACAGGAT
GAGGCCGTCA ACAGTCATCA GAAATTGAGC CGCTACTTCA GCGAAGTCAG TTTTTATCAG
ACCGCCATTC CAACCTACTA TGGCGGCATC ATGACTTTTG CCTGGGCCAG TAATAACCCG
GCGTTGCGCG CTATCGATCA ACAGAGTCTG CAGCAACGGT TTGATGCAGC TGAAATCGAA
TGCCGCTATT ACAACCCGGC TATTCACATC GGCAGCTTTG CCCTGCCACA ATATTTACTG
AATGCCCTGT CAGCCGCCCG CTGA
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| Protein sequence | MSRKEIWYET LHANFGQYFS IEKVLYHEKT DHQDLIIFEN AALGRVMALD GVVQTTERDE
FIYHEMMTHV PLLAHGNAKR VLIIGGGDGG MLREVCRHRN IEQITMVEID AGVVSFCRQY
LPNHSAGAYD DPRFRLVIDD GVNFVNACQE KFDIIISDCT DPIGPGESLF TSDFYQGCAR
CLNDGGVFVA QNGVCFLQQD EAVNSHQKLS RYFSEVSFYQ TAIPTYYGGI MTFAWASNNP
ALRAIDQQSL QQRFDAAEIE CRYYNPAIHI GSFALPQYLL NALSAAR
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