| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1002 |
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| Symbol | |
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| ID | 8121149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 1152900 |
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| End bp | 1153877 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644851393 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003003354 |
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| Protein GI | 251788633 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.550845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCAAC AAGTACAACT CACCGCGACG GTGGCCGAAT CTCAACTTGG ACAACGTTTA
GATCAGGCTT TGGCCGAATT GTTCCCTGAT TATTCCCGTT CTCGCATAAA AACGTGGATT
CTGGAACAGC GGGTACAGAT TAACGGTAAT ACGGTCGACA GACCAAAAGA GAAAGTGCTT
GGTGGAGAGT CCGTTGCCAT TGATGCTCTG ATCGAGGAAG AAGCGCGCTG GGAAGCGCAG
CCGATTTCGT TGGATATTGT GTATGAAGAT GACGATATCC TGGTTATCAA CAAACCGCGC
GATCTGGTGG TGCATCCTGG CGCCGGTAAT CCCGACGGCA CGGTGCTGAA CGCGCTGTTA
CATCATTATC CGGCGATTGC TGATGTTCCG CGCGCCGGCA TTGTTCACCG TTTAGACAAG
GATACCACCG GTTTGATGGT GGTTGCGAAA ACCGTGCCGG CACAGACCAG GCTGGTCGAG
TCGTTGCAAG CGCGTGAGAT CACCCGAGAA TATGAAGCGG TAGCCATCGG CACGATGACG
GCCGGCGGCA CTGTGGATGA ACCGATCGCT CGTCATTCCA CCAAGCGTAC ACATATGGCG
GTACATCCGA TGGGTAAGCC AGCCGTGACG CACTATCGCA TCATGGAGCA TTTCCGTGCG
CATACCCGCC TGCGTTTGCG GCTGGAGACC GGGAGAACCC ACCAGATTCG CGTTCACATG
GCGCATATTA ATCATCCGTT GATAGGCGAC CCGTTGTATG GCGGTCGTCC GCGTCTGCCG
AAAGGGGCGT CCGATACATT TATCGAGACG CTGCGCAATT TTGATCGTCA GGCGTTGCAC
GCTACCATGT TACGGCTTTA TCACCCGATT AGTGGTATTG AAATGGAGTG GCACGCCGCA
TTACCGCAGG ATATGGTAGA CCTCATTGCC GCACTGAAAG CGGATACTGA CGCGTTTAAA
GATCAACTTG ACTGGTGA
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| Protein sequence | MSQQVQLTAT VAESQLGQRL DQALAELFPD YSRSRIKTWI LEQRVQINGN TVDRPKEKVL
GGESVAIDAL IEEEARWEAQ PISLDIVYED DDILVINKPR DLVVHPGAGN PDGTVLNALL
HHYPAIADVP RAGIVHRLDK DTTGLMVVAK TVPAQTRLVE SLQAREITRE YEAVAIGTMT
AGGTVDEPIA RHSTKRTHMA VHPMGKPAVT HYRIMEHFRA HTRLRLRLET GRTHQIRVHM
AHINHPLIGD PLYGGRPRLP KGASDTFIET LRNFDRQALH ATMLRLYHPI SGIEMEWHAA
LPQDMVDLIA ALKADTDAFK DQLDW
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