| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0963 |
|---|
| Symbol | |
|---|
| ID | 8121106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1109204 |
|---|
| End bp | 1110247 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644851350 |
|---|
| Product | transcriptional regulator EutR |
|---|
| Protein accession | YP_003003315 |
|---|
| Protein GI | 251788594 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0447536 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACA ATCCGGTCAA CCTGCACCAT CTGGATGCAG AACGCCGTTT CCCGGCGGCA
ACGGCGGTAT CGCCGGACGA TAACGTCCAT CAGCGACAGA CACAGGATGT CTATGCCCAG
TCCCGCACCA TCACCGCCTG GCAACAGATT TACGATCAGG TTTCGCCGGG CCACTTTCAG
GGGGAATTAC GCGAAATCCT GCTCGACGGC ATCCAGCTCT GCCACGAATA CACCAATCTG
GCGTTGCGCC AGTCCTGCAT GATATGGCCG GACTCTTTCT GGTTCGGCAT TCCCGCTCGC
CATGCCGGCA CCGGCTTCAT CGGATCTCAG CCCATCGGCA ACGGCGCGAT TGCCGTCAGC
CCCGGCGGCA AAGAATTCGA ACTGAACACG CCGGATGATT ACGCCATTCT GGGCGTGGCT
ATCTCCCGCG ACGAACTGTT GCAATACACC GATGTGCTTG AAGAGCCGGA ACAACTCACC
CGGCTGCTGG CGCAGAGCGC CACCTTGTTG GTGGAACCGC ACAGGCGGGA AATCCTCTGG
TCATTCGTAC GCGAAGCGCT GTGGTATGGC TGCAACGAGC CGCAACGTTT GCAGCATAGC
AACACGGCCA AAGTAATGAA GCACAACCTG CTGACCACGG TGATCTCGTT TCTGGAAAGC
GCCCAGCCGG CCGACGCCAG CTCCGCACAT ACTGATAAAC GCATCGGCTA TCGCAGCCTG
ATCGGCCGCG CCAGAGAATA CGTACTCAGC CAGCAGTCGG AGCCGGTCAC GGTGCTCGAT
CTGTGCCGCC GCCTGCACGT CAGCCGCCGC ACGTTGCAAA ATGCTTTCTG CAATGTCATG
GGGTGTGGTC CCAACGCCTG GCTGAAGATG ATCCGCCTTA ATGCGGTTCG CCGCGAGCTG
GTCAGCCCCT ACTCCCGTCA TCACACCGTG CAGGACGCCG CAATGCAGTG GGGGTTCTGG
CACCTGAGCC AGTTCGCCTG CGACTACCAG CGGCTATTCA ATGAAAAACC ATCGGTGACG
CTCAAAGCAC GGCTGGCAAG GTAA
|
|---|
| Protein sequence | MKHNPVNLHH LDAERRFPAA TAVSPDDNVH QRQTQDVYAQ SRTITAWQQI YDQVSPGHFQ
GELREILLDG IQLCHEYTNL ALRQSCMIWP DSFWFGIPAR HAGTGFIGSQ PIGNGAIAVS
PGGKEFELNT PDDYAILGVA ISRDELLQYT DVLEEPEQLT RLLAQSATLL VEPHRREILW
SFVREALWYG CNEPQRLQHS NTAKVMKHNL LTTVISFLES AQPADASSAH TDKRIGYRSL
IGRAREYVLS QQSEPVTVLD LCRRLHVSRR TLQNAFCNVM GCGPNAWLKM IRLNAVRREL
VSPYSRHHTV QDAAMQWGFW HLSQFACDYQ RLFNEKPSVT LKARLAR
|
|---|
| |