| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0962 |
|---|
| Symbol | |
|---|
| ID | 8121105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1108158 |
|---|
| End bp | 1109126 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644851349 |
|---|
| Product | putative GTP-binding protein YjiA |
|---|
| Protein accession | YP_003003314 |
|---|
| Protein GI | 251788593 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.177818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCTA ACGTATTACC CGCGACGATT CTCACTGGTT TTCTCGGTGC CGGTAAAACG
ACGCTGTTGC GGCATCTGCT GCATGTCGAT CACGGTGAAA AGATCGCGGT GATTGAAAAT
GAATTCGGCG CGGTGGCGAT TGATGATGCC TTGCTGGGCG ACCGGGCCAC GCGTATCACC
ACCCTGAGCA ACGGCTGCAT CTGTTGCAGC AGCGCTAATG AACTGTCGGA TGCGCTGCAT
GATCTGCTGG ATGGGGTCGA CAGCGGCGAG CTGATATTCG AGCGGCTGGT GATCGAGTGT
ACCGGCATGG CTGATCCGGG GCCGGTGATT CAAACCTTTT TTTCCGACGA ACGCCTGAGC
CAGCGTTTCC TGCTGGACGG GGTGATCGCG CTGGTCGATG CGGTTCATGC CGACGATCAA
CTGAACCGGC ATACCGTGGC GCAGGCGCAG GTAGGCTACG CCGACCGGAT TTTGCTGACC
AAGACCGATC TGGCGGGGGA TACCCAGGCG CTGGAAGCGA GACTGGCGCG TATCAATGCG
CGTGCCACGC TGCATCGGGT GCTCAACGGC GAGATCGACC ACCGGCAGAT CTTCGGGGTG
GACGGTTTCA TGCTCAACGA CCGTTTGCCG GTATCTCTGC CGCGTTTCCG GCCGTTGATC
GAACAGGATA ACGCCATCAC CTCGCTGGTG GTGCAACTGA CGCGCCCGGT GGAGATGGCG
GCGGTATCGG CGGTGATGGA GCAACTGCTG GTGAATTGCG CCGACAACCT GTTGCGTTAT
AAAGGCGTGC TGGCGATCGC CGATGATGAT CGCCGCTTGT TGTTTCAGGG GGTACAACGG
CTCTACAGCG CCGATTGGGA TCGCCCATGG AACGCGGATG AACCGCGTGA AAGCGTGATG
GTATTTATCG GCATCCGGCT GCCGGAAGAC GATATCCGCC GCGCATTCGA TGCGCTGAAT
GCATCATGA
|
|---|
| Protein sequence | MMANVLPATI LTGFLGAGKT TLLRHLLHVD HGEKIAVIEN EFGAVAIDDA LLGDRATRIT
TLSNGCICCS SANELSDALH DLLDGVDSGE LIFERLVIEC TGMADPGPVI QTFFSDERLS
QRFLLDGVIA LVDAVHADDQ LNRHTVAQAQ VGYADRILLT KTDLAGDTQA LEARLARINA
RATLHRVLNG EIDHRQIFGV DGFMLNDRLP VSLPRFRPLI EQDNAITSLV VQLTRPVEMA
AVSAVMEQLL VNCADNLLRY KGVLAIADDD RRLLFQGVQR LYSADWDRPW NADEPRESVM
VFIGIRLPED DIRRAFDALN AS
|
|---|
| |