| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0954 |
|---|
| Symbol | |
|---|
| ID | 8121097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1099501 |
|---|
| End bp | 1100541 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644851341 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003003306 |
|---|
| Protein GI | 251788585 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.856165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCT CCATTCTGGC TCTGCCCGGT AGCATGTCGT CGGCCATTGC GGGGCTGGCC
GACATGTTCT GGATGGTCAA TCAGGCGCTG ATGACACGAC CGGAAGGGAA AGCGCTGCCC
GCGTCCGCCG GCCTGTGTTT TGAAACCGCG ATTATCAGTG CCGATGGCAA GCCGGTGCGC
GACGCGCAGG GACGGCTTAT CTACGTCGAC AGCTCGTTTG ACGCTAGCGA GAAATCAGAC
ATGGTGCTGG CCACCGGCAT GATGCTCGGC CCCGATAAAT TACCGGCGTC GGCCAGCTCC
GTTGGTGAAT CGGCGTGCTG GTTGAAACAG CAATACCAGC GAGGCGCGCA GATAGGCGGC
GCCTGTGCCG GAAGTTTCAT TTTAGGTGAA GCCGGGCTGC TGGATGGGCG GTTTTGCAGC
ACCACCTGGT GGCTCTACCA CACCTTTAAG CAGCGTTATC CCAAGGCGAA ACCGGTCTGG
GGAAAAGCGC TGGAAGAGCA GGACGGCATC ATCACGACCG GCGGCCCGCT ATCCTGGGTT
GAGCTTGCGC TGCATATTAT TCGACAGCAG GCCGGCCCCG ACATCGCCAA ACTGGCGGCG
GATATCGCCG TTGCCGACAG CCAGCCGTTG TCGCAGCGCA TTTATGCTCC GCAAGGGTTT
ATGAATACGG TGAATCCGTT ACTGCTGCGC GCAGAACACC TGATCCGATA CGAGAACCCG
TCAATCACGG CGGAAGAGCT GGCTCGCGCC CTAAATTTTA GCGATCGGAC ACTGCACCGA
AAAATCAAAG AGCTCACCAA CGAGAGCCCG AAAAATTTTA TTACGCGCGT TAGAATCGAA
ACAGCCTGTC TGTTGCTCGA AAACCCGATA GCCAACATCA AGCGGGTGGC GCAAGAGTGT
GGTTACAGTG AAGATACGGC GTTCAGGCGC GCGTTTTCAC AGTTGATGGG GATGACGCCC
GTTCAGTATA GAAAATGGGC GATGCGACGA AACGATAAGG CCGCAACGTC GGCACCGTCT
GAAATAAAAA ACCCCGGATG A
|
|---|
| Protein sequence | MRISILALPG SMSSAIAGLA DMFWMVNQAL MTRPEGKALP ASAGLCFETA IISADGKPVR
DAQGRLIYVD SSFDASEKSD MVLATGMMLG PDKLPASASS VGESACWLKQ QYQRGAQIGG
ACAGSFILGE AGLLDGRFCS TTWWLYHTFK QRYPKAKPVW GKALEEQDGI ITTGGPLSWV
ELALHIIRQQ AGPDIAKLAA DIAVADSQPL SQRIYAPQGF MNTVNPLLLR AEHLIRYENP
SITAEELARA LNFSDRTLHR KIKELTNESP KNFITRVRIE TACLLLENPI ANIKRVAQEC
GYSEDTAFRR AFSQLMGMTP VQYRKWAMRR NDKAATSAPS EIKNPG
|
|---|
| |