Gene Dd1591_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0908 
Symbol 
ID8117724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1055222 
End bp1056256 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content50% 
IMG OID644851301 
ProductCRISPR-associated protein, Cse4 family 
Protein accessionYP_003003266 
Protein GI251788545 
COG category 
COG ID 
TIGRFAM ID[TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.580096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAACC ACTTCAAAAA TACCCGCATT GAATTCCATA TCCTGCAATC TTTCCCGGTG 
ACCTGCCTTA ACCGTGATGA TGTCGGTGCC CCAAAATCAG CCATGATCGG CGGTGTTCCA
CGTGCTCGCG TGTCGTCACA ATGCTGGAAA CGTCAAGTTC GCCTTGCTAT GCCCGACTTT
GGTATTCGAC TGGGGGTTCG CAGCAAAAAG ATAGCAACCA TGCTGACTGA TGAGTGTCTG
GCACTGGGTG CCAGCGAAGC GCAAGCGAAC AGTTGTGGTG AAGCTATGGC TGCATTTTTT
TCCGACGACA CGTTGTTATT TCTGAGTGAT GCTGAAGCCA AAGCGTTTGC CGCGTATGCA
CAGGAACTCG GTTTTGAAGC ATCGAAACTG AAAGACAAAG AACTGGTAAA AGTGTCCAAG
AAGGTCGTGA ACAAAACGCT TGATGCTCTG GATATTGCGC TGTTTGGACG GATGGTCGCC
AAAGCACCGG ATATGAATAT CGAAGCAGCG GCGTCATTCG CTCATGCTAT CTCAACCCAC
AAGGTGACTA ACGAAGTGGA GTTTTTCACG GCAGTGGATG ATTGTAAGAC AGAGGACGAA
AGCGGTTCTG CACACATGGG AAGCCTGGAG TACAACTCCG CCACCTACTA CCGTTATGTG
AGCCTTGACC TGGGACAACT GGAACAAACG TTAGGAGAGG ACGCTAATCT TAACTCTGCT
GTAGAAGCCT TTGTAAAGGC GCTGTATGTC GCAGTGCCAG ACGCCCGCCA AACCACACAA
TCAGGTGCCT GTCCATGGGA ATACGCCCGC GTACTGGTGC GCAAGGGACA ACGACTGCAA
GCCTCTTTTG AACAACCCGT TAAAAGTAAA GGTGAAGGCT TCCTGCACCC AAGCAAAGAC
GAACTTAAAT CCTGGCTCGA CAAAAAAGAA AAGCTCTCAG GTTCACTGTT TGGCAAACAA
GGGGATTACG AATGGGGCGA GAATCTTGAT TACAGCATTG ATCACCTGAT CGCTGATCTA
CAGTCCCACC TGTAA
 
Protein sequence
MTNHFKNTRI EFHILQSFPV TCLNRDDVGA PKSAMIGGVP RARVSSQCWK RQVRLAMPDF 
GIRLGVRSKK IATMLTDECL ALGASEAQAN SCGEAMAAFF SDDTLLFLSD AEAKAFAAYA
QELGFEASKL KDKELVKVSK KVVNKTLDAL DIALFGRMVA KAPDMNIEAA ASFAHAISTH
KVTNEVEFFT AVDDCKTEDE SGSAHMGSLE YNSATYYRYV SLDLGQLEQT LGEDANLNSA
VEAFVKALYV AVPDARQTTQ SGACPWEYAR VLVRKGQRLQ ASFEQPVKSK GEGFLHPSKD
ELKSWLDKKE KLSGSLFGKQ GDYEWGENLD YSIDHLIADL QSHL