Gene Dd1591_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0888 
Symbol 
ID8117703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp1028192 
End bp1029223 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content62% 
IMG OID644851280 
Producttranslation initiation factor, aIF-2BI family 
Protein accessionYP_003003246 
Protein GI251788525 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.332412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCG TTAACACCAC CAGCCTCAAC GTCGTTGATA ACCAGCTCTG GATCCTTGAC 
CAACAGGCGT TACCGCAGGA AAAAATCTGG TGCCCCTGTC CGGATGTCGA TGCACTGGTC
GAACACATTC GCGCTCTGCG GGTACGTGGC GCACCGTTAA TCGGGCTGTC TGCCAGCCTG
TTGCTGGCGT TACTGGCGGA GCAGGGTCAA TCCCGGCCAC AGCTGGCGCA GGCACTGGAG
ACGCTGCGGG CTTCCCGCCC AACCGCCGTC AACCTGATGA ATAATCTGGA TCGCATGAAG
CAGGCGCTGG CGGCCGATGA TTTCGTCAAC GCCATGACGC AGGAAGCGCT GCGGTTGATT
GAGGAAGATA AAGCGCTGTG CGAACGCATC GCCGATAACG GCGCCGCGCT GGTGAAACCG
GGTAGCCGCC TGTTAACCCA CTGCAACACC GGCGGGCTGG CGACGGCGGG CGTCGGGACG
GCAATCGGCG TCATCCTGCG TGCTCACCGA CAGGGTAACG TGGAGAAAGT CTGGGTAGAT
GAAACCCGTC CGTTGTTGCA GGGCGGGCGG CTGACCGCCT GGGAACTGGG TGAATTGGCT
ATCCCTTATC ACTTGATCTG CGACTCGATG GCCGCGTCAC TGATGGCGCA AGGCCAGGTC
GATGCCATCT GGGTCGGTGC GGATCGCATC GCCGCTAACG GTGACGTCGC CAACAAAATA
GGGACTTACA GCCTGGCGGT GCTGGCGCAT TACCACGGTA TTCCATTTTA TGTCGCCGCC
CCCCACACCA CCCACGATCC GCACTGCCCG GACGGCAACG CGATTCCGAT CGAACAACGT
GCGGCCGGCG AAGTCACCGG CGTGGCCGGT AGTTTCGGTC AGTGCCAGTG GGCGCCGCAC
AACGCGCCGG TGTACAACCC GGCGTTCGAT GTCACGCCCG CGGCGCTTAT CAGCGGCTGG
GTGCTGGATA GCGGCGTTGT CACCCCGGAA CAGGTTAGCG CCGGCATTTT TCAGCACCCG
CTGGCCGGAT AA
 
Protein sequence
MQTVNTTSLN VVDNQLWILD QQALPQEKIW CPCPDVDALV EHIRALRVRG APLIGLSASL 
LLALLAEQGQ SRPQLAQALE TLRASRPTAV NLMNNLDRMK QALAADDFVN AMTQEALRLI
EEDKALCERI ADNGAALVKP GSRLLTHCNT GGLATAGVGT AIGVILRAHR QGNVEKVWVD
ETRPLLQGGR LTAWELGELA IPYHLICDSM AASLMAQGQV DAIWVGADRI AANGDVANKI
GTYSLAVLAH YHGIPFYVAA PHTTHDPHCP DGNAIPIEQR AAGEVTGVAG SFGQCQWAPH
NAPVYNPAFD VTPAALISGW VLDSGVVTPE QVSAGIFQHP LAG