| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0873 |
|---|
| Symbol | |
|---|
| ID | 8117688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 1013757 |
|---|
| End bp | 1015169 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644851265 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_003003231 |
|---|
| Protein GI | 251788510 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR02715] amidohydrolase, AtzE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.753798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCG CACAACTGTC TATTCGCTCG TTGCAAGCTG AACTGGCGGC CGGCCACCTT
TCCGCCACCG ACATTGCCCG CGACACGCTG GCGCGCATCG AACAGCACAA CCCGGCCGTC
AATGCTTATA CCGCCGTCAC GGCACAACGT ATGCTGACGG AAGCCAACGG CGTGGACCTC
AAACGCCGGT TAAGTGAGCC GTTGCCCGCG CTGGCGGGCG TACCCTATGC GGTAAAAAAC
CTGTTTGATG TCGCCGGCGA AACGACCCTT GCCGGCGCCA GGCTGTTCAG CCAACGCCCG
GCAGCCGCTC AGGATGCATT TGCGGTGCGC CAGCTACAAG CACAGGGGGC GTTGCTCTCC
GGATTGCTGA ATATGGATGC CTACGCCTAC GGCTTTACCA CCGAGAACAG CCACTACGGC
GCTACCCGCA ACCCACACGA TCTAACACGC ATCGCCGGCG GCTCGTCCGG CGGCTCGGCG
GCGGCGGTAG CGGCCGGTTT GGTGAATTTC TCGTTGGGCA GCGACACCAA TGGGTCGATC
CGCGTTCCCG CTTCGTTGTG CGGTATCTTC GGGCTGAAGC CGACGTTTGG CCGGTTATCG
CGTCAGGGAA CCCAGCCGTT TGTCGGCAGC CTCGATCACA TCGGCCCGCT GGCGCGTAGC
GTAGACGATC TGGCGCTGGT GTATGACGTA CTGCAAGGCC GCGATCCGGC CGATCGGTTT
CAGGCGGATC AACCACTGCG ATCCACGGTG CCTTCACTGG CGGACGCCGC GCCGCTGCGC
AGCCGGGTAC TGGGGGGTTA CTTCGCGCAA TGGTGCGATG AACAGGCCAC CGCCGCAGTG
CAGCAAGTCG CGGATGCCTT AAACGCCGAC CATGATGTGA TACTGGATAA TGCCGCGCTG
GCGCGTACTG CGGCGTTTAT TCTTTCCGCC AGCGAAGGCG GCAATCAGTA CCTGCCGGCG
CTGCACGACA CACCGGATCA ATTTGAGCCG CTTTCGCGTG AACGACTGTT GGCCGGCGCG
ATGATCCCCG CCGCCTGGTA TGTGCAGGCC CAGCGTTTCC GCGATCATTT CCGCCGGGAA
GTGCTGGCGC TGTTCAACGA TACCGATCTG CTGATTGCCC CGGCAACGCC CTGCCCGGCC
ACGCCGATCG GTCAGGAAAC CATGCGTATC AACCACACCG ATTTACCGAT CCGCGCCAGC
ATGGGCATGT TAACCCAGCC GATTTCGTTC GTCGGCCTGC CGGTGGTCAC CGTGCCGTTG
GCAACCGCCG GTGGATTGCC GATCGGCGTA CAGTTAATCG CCGCGCCGTG GCGGGAGGAC
GTGGCGCTGC GCGCCGCCTG GCATCTTGAA CAGCAGGGCA TCGCGCAGGC GCTGCCGCCC
ACGACGTTTC ACCCACAAGG ACTTTCCGCA TGA
|
|---|
| Protein sequence | MNPAQLSIRS LQAELAAGHL SATDIARDTL ARIEQHNPAV NAYTAVTAQR MLTEANGVDL
KRRLSEPLPA LAGVPYAVKN LFDVAGETTL AGARLFSQRP AAAQDAFAVR QLQAQGALLS
GLLNMDAYAY GFTTENSHYG ATRNPHDLTR IAGGSSGGSA AAVAAGLVNF SLGSDTNGSI
RVPASLCGIF GLKPTFGRLS RQGTQPFVGS LDHIGPLARS VDDLALVYDV LQGRDPADRF
QADQPLRSTV PSLADAAPLR SRVLGGYFAQ WCDEQATAAV QQVADALNAD HDVILDNAAL
ARTAAFILSA SEGGNQYLPA LHDTPDQFEP LSRERLLAGA MIPAAWYVQA QRFRDHFRRE
VLALFNDTDL LIAPATPCPA TPIGQETMRI NHTDLPIRAS MGMLTQPISF VGLPVVTVPL
ATAGGLPIGV QLIAAPWRED VALRAAWHLE QQGIAQALPP TTFHPQGLSA
|
|---|
| |