| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0824 |
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| Symbol | |
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| ID | 8120640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 954701 |
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| End bp | 956035 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644851210 |
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| Product | glycoside hydrolase family 28 |
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| Protein accession | YP_003003182 |
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| Protein GI | 251788461 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTAT TTATTCGCGC CTATCACCCC GCGGCTGATG GCATTACCCC CGATACGGCG
TTATTCCAGC AAGCGATCGA TGAGCTGGCG GCACAAGGCG GCGGTACGCT GGTGGTGGAA
CCGGGGCGTT ATTTACTGGG AGGATTGCAT CTGCCTTCCA ATTTCTGCCT GCAACTGGAT
GCGGGCGCAG AATTGATCGC CAGTGCTGAC TATGACGATT TTGCCCAAAA TACAACCGTC
AGCGTGGCTG AGCTGTCTGA CCGCGCTTTT TTGTATGCCC GGCAACAGCG CAATATCACC
CTGAGCGGGC AAGGGAAAAT TATCGGCAAC GCCGATGCTT ATTTTTCGGC GCAACCCGAT
GAACAAGGTT ATCGACTGCC GGCACGGCAC CGCCCGCGCA TTCTGGTGCT GGAAGATTGC
GAACAGGTTA AAATACAAGG CGTTACTATC GAAAATGCAC CGATGTGGAC CGTCCATCTG
GTCAGTTGCC GCCAGGTCAA CGTCGAGCGT CTGACGGTGG ATAATGACAT GACGATGGCC
AACACCGACG CGCTTAACCT CGACAGCTGT CAGGATGTTA CCGTACGCGA CTGCCATTTG
AGCGCAGCCG ATGACGCACT CTGCATCAAA ACCACCGCCA AACCGCCCGC CATGCAATAT
AAAGCCCAGC GCATGACCGT CAGTCATTGT CGGCTGCGTT CACGCAGTTG CGCGCTAAAA
ATCGGTACCG AAACCTTCGC CGATATTGAA GATTTAACCG TTAGCCACTG CGCCATCTAC
GACTCCAATC GTGGCATTGG TTTGATTTCC CGCGATGGCG GCGCCTTTCG GCGCATCTGC
TTTAGCGATA TCACTTTCGA ATGCGTCGCG GCACCGCCTT GTCACTGGGG TAAAGCTGAC
CCCATCTTTA TCTCAGTACG CTACCGCGAT CCGGCGATTG AACCGGGGGT TGTAGAGGAC
GTGCGCTTCG TGCGGTTGTC CGGTGTCAGC GAAGGCGCGA TCAATTTACA CAGTACGCCG
GCTGGTTATA TCCGTCATAT TCACTTCGAT GACATCACGC TTGAACAGCG CCCAAGCCAT
TCGCCGGAAC AAGGGTTGTA CGACGTTCGT CCCCCTTGCA ACCCGGCCCG GCCGACCGGC
ATGGGGCTGG ACAATGCTTA TCTGGTCAAC CCGGATACCG GGCGCGCTTA TGGGGTAGAA
ACCTACCCGA CCGGCCTACC GGCGCTGTTC GCACGCGGCG TGAACGACTT AACCTGGCAC
AAGATGACGC TGCAACGCCC ATCGCCGTTA CCCGTTGGCT GGAGCCCCGA TGCGATTGTT
GAACTCGCGG AATAA
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| Protein sequence | MRLFIRAYHP AADGITPDTA LFQQAIDELA AQGGGTLVVE PGRYLLGGLH LPSNFCLQLD
AGAELIASAD YDDFAQNTTV SVAELSDRAF LYARQQRNIT LSGQGKIIGN ADAYFSAQPD
EQGYRLPARH RPRILVLEDC EQVKIQGVTI ENAPMWTVHL VSCRQVNVER LTVDNDMTMA
NTDALNLDSC QDVTVRDCHL SAADDALCIK TTAKPPAMQY KAQRMTVSHC RLRSRSCALK
IGTETFADIE DLTVSHCAIY DSNRGIGLIS RDGGAFRRIC FSDITFECVA APPCHWGKAD
PIFISVRYRD PAIEPGVVED VRFVRLSGVS EGAINLHSTP AGYIRHIHFD DITLEQRPSH
SPEQGLYDVR PPCNPARPTG MGLDNAYLVN PDTGRAYGVE TYPTGLPALF ARGVNDLTWH
KMTLQRPSPL PVGWSPDAIV ELAE
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