| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0815 |
|---|
| Symbol | relA |
|---|
| ID | 8120631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 942536 |
|---|
| End bp | 944773 |
|---|
| Gene Length | 2238 bp |
|---|
| Protein Length | 745 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644851201 |
|---|
| Product | GDP/GTP pyrophosphokinase |
|---|
| Protein accession | YP_003003173 |
|---|
| Protein GI | 251788452 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000200525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCGG TAAGAAGTGC GCATTTGAAT ACCGAAGGCA AGTTCGTGCC GGACGCGTGG
ATTGCCTCCC TGGGTATCGC CAGTAAAACA TCGTGCGAAC GCCTCGCCGA CACCTGGCGC
TACTGCGAAG AAAAAACAGA AGGCCACCCG GATGCGATGC TGCTGTTGTG GCGCGGCATC
GAGATGGTGG AAATTCTCTC CACCCTGAGT ATGGATAACG ACAGTATGCG CGCGGCGATG
CTGTTCCCGT TGGCGGATGC CAATGTGGTG GAAGAGGATA CGCTGCGGGA AACCTTCGGC
AAGAATATCG TCAATCTGGT GCATGGCGTG CGCGATATGG ATGCGATTCG CCAGCTTAAA
GCCACCCAGC ACGATTCGAT GGCTTCCGAG CAGGTGGACA ATATCCGCCG TATGCTGCTG
GCGATGGTGG AAGACTTTCG CTGCGTAGTG ATCAAGCTCG CCGAGCGCAT CGCCCACCTG
CGTGAAGTGA AGGATGCGCC GGAAGAAGAA CGTGTACTGG CGGCCAAAGA GTGTACCAAT
ATCTATGCGC CGCTGGCGAA TCGGCTGGGC ATCGGCCAGC TCAAGTGGGA GCTGGAGGAT
TTCTGCTTCC GCTATCTGCA TCCGGATGAG TACAAACGCA TTGCCAAACT GCTGCACGAA
CGGCGTATCG ACCGTGAGCA GTACATCGAC GACTTCGTTA AAAACCTGCG CGCTTCGATG
CAAACGGAAG GGCTTAAGGC CGAGATCTAC GGCCGCCCCA AACATATCTA CAGCATCTGG
CGCAAGATGC AGAAAAAATC GCTGTCGTTC GATGAGTTGT TCGACGTGCG GGCGGTGCGC
ATCGTGGTAG AGCGTTTGCA GGATTGTTAC GCCGCGCTCG GTATCGTGCA TACCCATTAT
CGCCACCTGC CGGATGAATT CGACGACTAT GTCGCCAACC CTAAACCCAA CGGCTATCAG
TCGATCCACA CCGTGGTGCT GGGGCCGGGC GGCAAGACGC TGGAAATTCA GATTCGTACC
CGGCAGATGC ATGAAGATGC CGAGTTGGGC GTCGCCGCGC ACTGGAAATA CAAGGAAGGC
GCCGCCACCA GCGGGCGCTC CGGTTACGAA GGGCGTATTG CCTGGCTGCG TAAGTTGCTG
GCCTGGCAGG AAGAAATGGC CGACTCGGAC GAAATGCTCG ACGAGGTACG CAGCCAGGTA
TTCGACGACC GCGTTTACGT ATTTACCCCC AAAGGCGATG TGGTGGATTT GCCGACCGGC
TCCACGCCGT TGGATTTTGC CTACCATATT CACAGCGACA TCGGTCACCG TTGCATCGGC
GCCAAAGTGG GCGGGCGTAT CGTGCCCTTC ACTTATCAGT TGCAAATGGG CGACCAGATT
GAAGTCATCA CCCAGAAGCA GCCGAACCCA AGCCGCGACT GGTTGAATCC TAATCTGGGG
TATATCACCA CCAGCCGCGG GCGGTCCAAA ATCCATAACT GGTTCCGCAA GCAGGACAGA
GACAAGAATA TTCTGGCGGG TAAACAGATT CTGGATGATG AGCTGGCGCA TCTCGGCGTG
AGCCTGAAGA TGGCGGAAAA ACTGCTGTTG CCGCGTTACA ACATCAATTC GATGGATGAA
TTGCTGGCGG GCATCGGCGG CGGCGATATC CGCCTCAATC AGTTGGTGAA TTTCCTGCAG
TCGAAGGTGA ATCAGCCGAG TGCGGAAGAG CAGGATCGCG AAGCGCTGCG CCAGTTGACG
CAGAAATCTC AGCAGCCGGC TCAGCGCGTC AGCGCTAAAG ACAACGGCCG GGTAGTGGTG
GAAGGGGTCG GCAACCTGAT GCATCACATC GCGCGCTGCT GCCAGCCGAT TCCGGGTGAC
GATATTATCG GCTTCATCAC CCGCGGACGC GGTATTTCCA TCCACCGTGC CGACTGCGAA
CAGCTCGACG ACCTGCGCAG TCACGCGCCG GAGCGCATTG TCGAAGCGGT ATGGGGCGAA
AGCTACTCCA GCGGCTATTC GCTGGTAGTC AGGGTGACCG CCAACGATCG TAGCGGCCTG
CTGCGTGATA TCACCACCAT TCTGGCTAAC GAAAAGGTCA ATGTGTTGGG GGTTTCAAGC
CGCAGCGACG TAAAACAGCA GCTCGCCACC ATCGACATGG ACATCGAGAT CTACAACCTG
CAGGTGCTGG GCCGGGTGCT GGCCAAGCTG AATCAACTGC CGGATGTGAT TGACGCCCGG
CGGTTGCAGG GCAATTGA
|
|---|
| Protein sequence | MVAVRSAHLN TEGKFVPDAW IASLGIASKT SCERLADTWR YCEEKTEGHP DAMLLLWRGI
EMVEILSTLS MDNDSMRAAM LFPLADANVV EEDTLRETFG KNIVNLVHGV RDMDAIRQLK
ATQHDSMASE QVDNIRRMLL AMVEDFRCVV IKLAERIAHL REVKDAPEEE RVLAAKECTN
IYAPLANRLG IGQLKWELED FCFRYLHPDE YKRIAKLLHE RRIDREQYID DFVKNLRASM
QTEGLKAEIY GRPKHIYSIW RKMQKKSLSF DELFDVRAVR IVVERLQDCY AALGIVHTHY
RHLPDEFDDY VANPKPNGYQ SIHTVVLGPG GKTLEIQIRT RQMHEDAELG VAAHWKYKEG
AATSGRSGYE GRIAWLRKLL AWQEEMADSD EMLDEVRSQV FDDRVYVFTP KGDVVDLPTG
STPLDFAYHI HSDIGHRCIG AKVGGRIVPF TYQLQMGDQI EVITQKQPNP SRDWLNPNLG
YITTSRGRSK IHNWFRKQDR DKNILAGKQI LDDELAHLGV SLKMAEKLLL PRYNINSMDE
LLAGIGGGDI RLNQLVNFLQ SKVNQPSAEE QDREALRQLT QKSQQPAQRV SAKDNGRVVV
EGVGNLMHHI ARCCQPIPGD DIIGFITRGR GISIHRADCE QLDDLRSHAP ERIVEAVWGE
SYSSGYSLVV RVTANDRSGL LRDITTILAN EKVNVLGVSS RSDVKQQLAT IDMDIEIYNL
QVLGRVLAKL NQLPDVIDAR RLQGN
|
|---|
| |