| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0767 |
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| Symbol | |
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| ID | 8119490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 883030 |
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| End bp | 885498 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644851153 |
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| Product | exoribonuclease R |
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| Protein accession | YP_003003125 |
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| Protein GI | 251788404 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.630081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAG ATCCGTTTCT GGAACGTGAA GCAGAAAAAT ACGAATTCCC CATTCCCAGC
CGCGAATACA TTCTGGAACA CCTGGCAAAA CGGGATACGC CCATCAGCCG TGAAGAGCTG
GCGAGTGATC TGCAATTAAC CAGCGATGAA CAACTGGAAG GGCTGCGCCG TCGGTTGCGC
GCCATGGAGC GTGACGGGCA ACTGGTGTTT ACCCGTCGTC AGTGCTACGC GTTGCCGGAA
AAACTGGATT TATTGCGTGG TACGGTGCTC GGCCATCGCG ACGGCTACGG CTTTCTGCGA
GTGGAAGGGC GTAAAGACGA TCTTTATCTT TCCGCCGAGC AGATGAAAAC GGTGATCCAC
GGCGATGTGG TGCTGGCCCA GCCGTTGGGT GAAGACCGCC GAGGACGTCG GGAAGGGCGC
ATCGTACGGG TGCTGGAACC GCGTACCAGC CAGATAGTCG GGCGTTATTT CACCGAAGCC
GGCACCGGTT TCGTGGTGCC GGACGACAGC CGCCTGAGTT TTGACATTCT GATCCCGCCG
GAATGTATCG CCGGTGCCCG TATGGGGTCG GTGGTGGTGG TGGAACTGAC CCAGCGCGCC
ACCCGCCGAA CCAAGGCTAT CGGCAAGATC GTGGAGATCC TCGGCGACAA CATGGGCACC
GGGCTGGCGG TGGATATCGC GCTGCGCACC CATGAGATCC CGCATAGCTG GCCGCCCAAA
GTGGAAGAGC AGGTGAGCGA CCTGACCGAC GAAGTGCCGG AAAACGCCAA GAAAGGCCGG
GTTGACCTGC GCGCTCTGCC GCTGGTCACC ATCGACGGCG AAGACGCGCG TGACTTCGAC
GATGCGGTGT ACTGCGAGAA GAAACGCGGC GGCGGCTGGC GGCTGTGGGT GGCGATCGCC
GACGTCAGCT ACTACGTACG CCCTGGCACG GCGCTGGACC ACGAAGCCCG CGCGCGCGGC
ACCTCGGTTT ACTTCCCGTC TCAGGTGGTG CCGATGCTGC CGGAAGTGTT GTCCAACGGC
TTGTGCTCAC TGAATCCGCA GGTGGATCGC CTGTGTATGG TGTGTGAGAT GACGGTTTCC
TCACAGGGGA AATTATCCGG CTACACATTC TACGAAGCGG TGATGAGTTC GCACGCTCGC
CTCACCTACA CCAAGGTGTG GAGCATTTTG CAAGGCGACG AGGCGCTGCG TGAGCAGTAC
CAGCCGCTGG TGGCGCCGCT GGAGGAACTG CACCGGATGT ATAAGGTGCT GGAACATGCG
CGTGAGGTGC GCGGCGGCAT CGCGTTTGAA ACCGAAGAAG CCAAATTTAT CTTTAACGCC
GAACGCCGCA TCGAACGGGT GGAGGCGGTG GTGCGCAACG ACGCGCACAA GTTGATCGAA
GAGTGCATGA TTCTGGCGAA TATCTCGGCG GCGAAGTTTG TCGAGAAGAG CGAAGAGCCG
GCGCTGTTCC GCGTGCATGA CCAGCCCAGC GAAGACCATG TGCTGGCGCT GCGTAGCGTG
CTGGGCGAGC TGGGGTTGAC GCTGACAGGC GGCATGAAAC CGCAGCCGAA AGATTACGCC
GAACTGATGG ACTCCATTGC CGACCGGCCG GATCACGAGA TGCTGCAAAC CATGCTGCTG
CGCTCGATGA AACAAGCGGT GTATGACCCG GAAAATCGCG GTCACTTCGG CCTGGCGCTG
ACCTCGTACG CGCATTTCAC CTCGCCTATC CGGCGTTATC CGGATTTGTC GCTGCACCGC
GCCATCAAGT ACTTGCTCAG CGACCGTAAA GCCCGCTGGA CCCAGAGCGG CGGCTGGCAC
GCCGATTTCA ACGAGATGCT GCAACTGGGC CAACACTGCT CGATGACCGA ACGTCGTGCC
GACGAAGCCA CGCGTGACGT GGCCGACTGG CTGAAGTGCG ACTTCATGCA GGATCACGTC
GGCGAAACCT TCACCGGCAT CATCTCCAGC GTCACCGGTT TTGGTTTCTT CGTACGTCTC
AACGACCTGT TCATTGACGG TCTGGTGCAC GTCTCTACCC TGGATAACGA CTATTACCGT
TACGATAATG TCGGCCAGCG CTTGATCGGT GAATCCCGCG GTCAGACCTA CCGGTTGGGG
GATGAAGTGG AAATCCGCGT GGAAGCGGTG CACATGGACG AACGCAAGAT TGATTTTGCG
CTGATCTCTT CCACCCGTAA GGTGCGTGGC GAAGGCAAGA CTGCGCGCGA CCGGGCGAAG
AAAGGCAGCG ATGCCGGCAC GAAGCCGCCG CGTCGTCGCC GTACCGGGCA ACGCAGCAAC
TTTGAGCCGG ATAGCACGTT CCGTTCCGAA GGCGGCAAGC GCCAGCCGGC CGGTAAGGAT
AAAGCCAAAC CGAACGGCAG CGGCAAAAAG AAGGCGGCCA AATCGCAAAA GAACGCTGAA
AAAACGCGTA AAATTGCAGC GGCCACCCGT GCCAAACGCG CCGACAAAAA GAAAAAGCCG
ACGGAGTGA
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| Protein sequence | MSQDPFLERE AEKYEFPIPS REYILEHLAK RDTPISREEL ASDLQLTSDE QLEGLRRRLR
AMERDGQLVF TRRQCYALPE KLDLLRGTVL GHRDGYGFLR VEGRKDDLYL SAEQMKTVIH
GDVVLAQPLG EDRRGRREGR IVRVLEPRTS QIVGRYFTEA GTGFVVPDDS RLSFDILIPP
ECIAGARMGS VVVVELTQRA TRRTKAIGKI VEILGDNMGT GLAVDIALRT HEIPHSWPPK
VEEQVSDLTD EVPENAKKGR VDLRALPLVT IDGEDARDFD DAVYCEKKRG GGWRLWVAIA
DVSYYVRPGT ALDHEARARG TSVYFPSQVV PMLPEVLSNG LCSLNPQVDR LCMVCEMTVS
SQGKLSGYTF YEAVMSSHAR LTYTKVWSIL QGDEALREQY QPLVAPLEEL HRMYKVLEHA
REVRGGIAFE TEEAKFIFNA ERRIERVEAV VRNDAHKLIE ECMILANISA AKFVEKSEEP
ALFRVHDQPS EDHVLALRSV LGELGLTLTG GMKPQPKDYA ELMDSIADRP DHEMLQTMLL
RSMKQAVYDP ENRGHFGLAL TSYAHFTSPI RRYPDLSLHR AIKYLLSDRK ARWTQSGGWH
ADFNEMLQLG QHCSMTERRA DEATRDVADW LKCDFMQDHV GETFTGIISS VTGFGFFVRL
NDLFIDGLVH VSTLDNDYYR YDNVGQRLIG ESRGQTYRLG DEVEIRVEAV HMDERKIDFA
LISSTRKVRG EGKTARDRAK KGSDAGTKPP RRRRTGQRSN FEPDSTFRSE GGKRQPAGKD
KAKPNGSGKK KAAKSQKNAE KTRKIAAATR AKRADKKKKP TE
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