Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0762 |
Symbol | |
ID | 8119485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 875671 |
End bp | 877740 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644851148 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_003003120 |
Protein GI | 251788399 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGTT CTGCATGGAA TTCAGAAAGT CTGTTTCAGG CCATCCTTGA CCGCTGCCCA GTGGGCATCG CCGTTATCAA TTACGACGGA CACTATGTCA CCGTCAATCC GGCGTATGGC GCCATCTATG GTTATACCCA GGAGGAAATG GCAGGCCGTT CTTTTACCAT GGTTTTTCCT GAGTCCGCCC GCGATTCCGT ACTCGCCCGC CATCGGCAGT TTCTGGATGA AGGCGGTACG CTGGGCGGGG AATGGACCGT GATGCGTCGT GATGGCGTCA TCCTGACCAT TTGGTCGGAA TCCGTCCCCT TCGCGCAGCA TGGGCACAGA GCCGACCGAC TGGTGTATGT CCTTGATATT ACCGAGCGCC AGAAAGCACG CGAACAGATG AAGATTGCCG CCGCCGTCTA TGAGAGCACG CAGGAAGCCA TCATCGTCAT CAATACCAGC CGTAGCATTA TTTCCATTAA CCCGGCTTTT ACCCGCCTGA CCGGATATAG CGCGGCCGAT GTCGTGGGGC AACCATCATA CATATTTCGT TCGGACCGAC ACGACGCCGA TTTCTATACC GCCATGTGGC GTACTGTTGA CGAAGACGGC GTGTGGGTAG GTGAAATGTG GGATCGCAAA AAAGACGGCA GCGATTACCT CAAGGAAATA ACGATCAATG TGATCAAAGA CGCGGCAGGC ACACCCATAA ATTATGTCGG CGTATTTTCC GATATCACCC AGCGCAAAAA GCAGGAAGCG CTGATTTGGC GGCAAGCCAA CTATGACGCG GTTACCACCT TGCCGAACCG GCATCACTTT CAGGATAAGC TTGAGCGGGC GGTTGAGCAC GCCAAACAGA GCGGCCGCCC AATGGCGCTG ATGTTGATAG ACCTCGACCA TTTCAAATCG GTCAACGACA GCCTGGGACA TCGTGCCGGC GATGCGCTGT TGCTTGCGGT GTCGAACCGC CTTACCGACT GTGTGCAAGG AGCCGATACC ATCGCCCGTC TGGGGGGAGA CGAATTCGCC ATTATCCTGA CCGATCTGCA CCAAAACGGC GATAGTGGAT GCCTGGCCAG AACACTGCTC GCACAGTTGG CGCAACCGTT CAATATCGAC GGAGAAAGTA TGCTGGTTTC AGCCAGCATC GGTATTGCTC TCTTCCCCAA CGATAGCGAT ACGTTGGAAG AGCTGTTCAA AAATGCCGAT CAGGCGATGT ATGCCGCCAA GAGCGCCGGG CGTAACTGCT TCAACTACTA TACGCCGGCC CTGCATCAGG CTGCACGCGC CCGTTTACGC CTGACCAACG ACCTGCGCAC CGCAATCCAG TGCGGTCAGT TCGAGGTCTA CTACCAACCC ATCATCGAGC TGAGCACCAA TAAAGTGGTC AAGGCCGAAG CGCTGGTGCG CTGGCGTCAT CCCATCCGCG GCATGATAAG CCCGGCGGAG TTTATCCCTC TTGCCGAGGA TACCGGGCTC ATCGTTCCGC TCGGCGACTG GGTCGCACGG CAGGCCATTA CCCAACTGGC GCAGTGGCGC AAAATCTTCG ATCCCCATTT TCAGGTCGCC ATCAACCAGT CGCCGGTGCA ACTGCGCAGC AAAGACTTCA CGGAAATGAC CTGGGTACAG GAACTGGCCC AACACGGATT AGAGGGCAAC GCCGTGATCA TCGAAATCAC CGAAGGGCTG CTGCTGAATG CGGAATCGCG GGTGAACGAC AACCTGCACC TGTTCCGTGA TACCGGGATA CAAATCGCCA TTGATGATTT CGGCACCGGC TATTCATCAC TCGCCTACCT GAGGAAATTC GACATTGATT GCCTGAAAAT AGACCGCTCC TTCGTCGAAG ATCTGGATGG CGTCGGGTTT GAGTTGTGCG TGGCGATTAT CGCGATGGCG CACAGCCTTG GCCTCAAGGT GGTGGCCGAA GGGGTCGAAA CCCAACAGCA GTGTGACACC CTCGCCCGTA TCGGGTGCGA CTATGCGCAA GGGTTCCTGT TTTCACGTCC CGTTCCTGCC CCGGAGTTGA CGATACTCCT GCTCGCCGCA GCCGAACCCT CCGTGATGAA ATCAGAGTAA
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Protein sequence | MTGSAWNSES LFQAILDRCP VGIAVINYDG HYVTVNPAYG AIYGYTQEEM AGRSFTMVFP ESARDSVLAR HRQFLDEGGT LGGEWTVMRR DGVILTIWSE SVPFAQHGHR ADRLVYVLDI TERQKAREQM KIAAAVYEST QEAIIVINTS RSIISINPAF TRLTGYSAAD VVGQPSYIFR SDRHDADFYT AMWRTVDEDG VWVGEMWDRK KDGSDYLKEI TINVIKDAAG TPINYVGVFS DITQRKKQEA LIWRQANYDA VTTLPNRHHF QDKLERAVEH AKQSGRPMAL MLIDLDHFKS VNDSLGHRAG DALLLAVSNR LTDCVQGADT IARLGGDEFA IILTDLHQNG DSGCLARTLL AQLAQPFNID GESMLVSASI GIALFPNDSD TLEELFKNAD QAMYAAKSAG RNCFNYYTPA LHQAARARLR LTNDLRTAIQ CGQFEVYYQP IIELSTNKVV KAEALVRWRH PIRGMISPAE FIPLAEDTGL IVPLGDWVAR QAITQLAQWR KIFDPHFQVA INQSPVQLRS KDFTEMTWVQ ELAQHGLEGN AVIIEITEGL LLNAESRVND NLHLFRDTGI QIAIDDFGTG YSSLAYLRKF DIDCLKIDRS FVEDLDGVGF ELCVAIIAMA HSLGLKVVAE GVETQQQCDT LARIGCDYAQ GFLFSRPVPA PELTILLLAA AEPSVMKSE
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