| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0754 |
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| Symbol | |
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| ID | 8119477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 868943 |
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| End bp | 870334 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644851140 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003003112 |
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| Protein GI | 251788391 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.952691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTGATC TGTACCACTG GTTTAAAGCG CTCTGGTCAA CCGTGTGTCG AAGAAAAACG
GCGGCTGCCG CGAGAGATGC GCAAATTGTG TCGGCCTGTA GTTCATTATT GATGAACGCA
TCGACACAGG CGGCGATGAT CTCCACGGAT CAGGACAATA AGATCACGCT GTTCAATTCG
GGCGCGGAGC GGCTATTTGG GTTTAGCGCT CAGGAGGTCA TCGGTCTTGA TGCCGGCACG
GTGCTGCTGC GTCAGGGCGA TGTCGGGCAG TTGTCGCCAC AGGAACTGTT ATGCTGCAAC
CAGGCTTTTT CTGCATGGTG CTACCGAAAG AAAGAGGGCG GCATTTTCTG GGGCGAACTC
AGTTTTCATG AGATTCGCCT GCCCAATGGG CATCTACTCG GTTATCTCAG CATTATTACT
GATATTACCG AACGAGAGCG GTTGCAGGAG CAGCTACAAC AACAGCAAAA AATGATGGAT
TTGCTGTTGC AGCGTGCGCC GTCGGTACTC TATACATTTC AGGTTCGCGG CGAGGACAGG
CGGTTTGTTT ACTGTAGCCC GGTATCGACC CGGTTATTGG GCCTGACGCC ACAGATGATG
ACCGCCGTGC CGTTCGGCCC CGGTCACCCG TTGCGGGAAA TAATCCTGCC GGAGGATCTT
GAACGCATCG TACAGCATTA CCACAGCGGT AATTTTCATC ACCATAGCTG GCGTAGCAAT
TTTCGCATCT GCGCCGAAAA CGGTGATGTC CGTTGGATCC ACACGGAAGC CAGCGCTTCC
CACCCGGGTG ACGGCAGCAT CGTGTTTTAT GGGTCGATGC TCGACGTTAC CGAACTTAAA
CAGTCGGAGA CGTTGCTTCA GGTACTGGCC CAGACGGATT CGTTGACCGG CATCGCTAAT
CGCCGCCATT TCGATGAGCG CTATCAGCAC CTGTGGCGTC AGCAGGAGTC CATGCAAAAG
CCGTTATCGT TGCTGATGAT CGATATCGAC CGCTTTAAAC GCTTTAATGA CAGCTATGGG
CACAGTAAAG GCGACGCCTG TATCAAGTCG GTTGTAGAAA CGCTGGCGGC GCAGTTACCG
TCGTCAGAAT GCCTGTTAGG GCGGTACGGC GGCGAAGAGT TCATCATGGT GTTGCCGGAA
ACGGACCACC GGCAGGCTTT GATACTGGCG GAACGCTGTC GTCAGGCGGT GGAGTCGATG
GAAATCCCGC ATACCAAGTC GCCGCAAGGC GTGGTAACCG TGAGTATCGG CGTCGCCGCC
GCAAAGCCGG GGGAAACCGG CAGCAGCATG ACGCAACTGA GTAATGACGC CGATCAGGCG
CTTTATCGCG CTAAACATCA GGGGCGCAAC CGGGTAGAGG CAAGCCTGTC GGCGCACTCG
CCGCCGCCCT GA
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| Protein sequence | MPDLYHWFKA LWSTVCRRKT AAAARDAQIV SACSSLLMNA STQAAMISTD QDNKITLFNS
GAERLFGFSA QEVIGLDAGT VLLRQGDVGQ LSPQELLCCN QAFSAWCYRK KEGGIFWGEL
SFHEIRLPNG HLLGYLSIIT DITERERLQE QLQQQQKMMD LLLQRAPSVL YTFQVRGEDR
RFVYCSPVST RLLGLTPQMM TAVPFGPGHP LREIILPEDL ERIVQHYHSG NFHHHSWRSN
FRICAENGDV RWIHTEASAS HPGDGSIVFY GSMLDVTELK QSETLLQVLA QTDSLTGIAN
RRHFDERYQH LWRQQESMQK PLSLLMIDID RFKRFNDSYG HSKGDACIKS VVETLAAQLP
SSECLLGRYG GEEFIMVLPE TDHRQALILA ERCRQAVESM EIPHTKSPQG VVTVSIGVAA
AKPGETGSSM TQLSNDADQA LYRAKHQGRN RVEASLSAHS PPP
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