Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0727 |
Symbol | |
ID | 8119450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 839086 |
End bp | 839928 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644851114 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003003086 |
Protein GI | 251788365 |
COG category | [R] General function prediction only |
COG ID | [COG4132] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGAAAAA GCTGGCTGGC GGCGCTGATT CTGCTGCCAT TCTTTGTGGT GTTTTTCGCG TTCCAGATAG CGCCGCTGAT CTGGATTGCG GTCAACAGTT TTTACAGCGA AACCGAGAGC GCCTGGGGGC TGGCGAACTA CGTCGATATC CTGACGTCGC CGTTTTACCA GCAGGCGATC CGTTTCTCGC TGGATATTGC TTTCTGGTCC AGCCTGTACG GCCTGGTCAT CGCGCTCATC GGCGGTTATT CGCTGCGCCA ATTGGGCGAG GGCGGCTTGC AGCGCTTCGT GATGGCGTTT TCCAACATGA CCAGCAATTT CGCCGGGGTG CCGCTGGCGT TCGCCTTTGT GATCATGCTG GGGTTGAACG GTTTTCTTAC TCTACTGCTG AAGCAGTACG GGTTAATTGA CGGTTTCAAC CTCTATTCGC GGGACGGCCT GATTCTGATT TACACCTATT TTCAGATCCC GCTGGGCATC CTGTTGCTCT ATCCGGCTTT CGACGGCCTG CGCGACGAGT GGCAAGAGTC GGCGGCGTTG CTGGGCGCGA GCCGCTGGCG CTATTGGCGG CACATCGGCA TTCCGGTGCT GACGCCGGCG CTGCTGGGTA CTTTCGTGAT TTTGCTGGCC AACGCGCTGG GGGCGTACGC CACGCTCTAC GCGCTCACCA CCGGCAACTT CAACGTGGTG CCGATTCGCA TTGCGTCGCT GGTTTCCGGC GACATCACGC TCGACCCCAA CCTGGGCAGC GCGCTCTCTA TGCTGCTGGT ACTGCTGATG GCGCTGATCA CTCTGGCGCA CCAGTGGTTG CTGCGCCGGA GTTATAGCTA TGTCTCACGA TAA
|
Protein sequence | MRKSWLAALI LLPFFVVFFA FQIAPLIWIA VNSFYSETES AWGLANYVDI LTSPFYQQAI RFSLDIAFWS SLYGLVIALI GGYSLRQLGE GGLQRFVMAF SNMTSNFAGV PLAFAFVIML GLNGFLTLLL KQYGLIDGFN LYSRDGLILI YTYFQIPLGI LLLYPAFDGL RDEWQESAAL LGASRWRYWR HIGIPVLTPA LLGTFVILLA NALGAYATLY ALTTGNFNVV PIRIASLVSG DITLDPNLGS ALSMLLVLLM ALITLAHQWL LRRSYSYVSR
|
| |