Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0690 |
Symbol | |
ID | 8119733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 788504 |
End bp | 790384 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644851078 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_003003050 |
Protein GI | 251788329 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTATCAC AAAGAACACT CAATGCTCTA AGTGGTATAA ACAAAGCCAG TACACAAGGC TATAAGATCA AGAAGCTGCA CAAAATCATG TGTAGCAATA AAGATCTTTG GGCGCAGGCC TATGCCAATA TTTATTCTAA TCAGGGAGCC ATGACGAGAG GAATAAATAA TAATACGATG GATGAAATGA GCGTGGACAG GATTATTAAT CTTATTCAGC TTATAAACTC AGATTCGTAT AAACCCAAAC CTTGCAGGCG CACGCACATA CCTAAAGATG CGCGAAAGCC GAATGGAAAG AAACGTCCAT TAGGTATTCC AACTGGAGAC GATAAATTAA TACAGGAAGT AATGAGGATG TTACTGGAAG AAATCTATGA ACCGGTTTTT AGCGACTGGA GCTATGGATT TAGACCTAAA CGTTCCTGTC ATTCTGCATT AAAAGAAATC AGAAACGGTT GGAAAGGAAC AAAATGGGTA TGTGATGTTG ATATCAAAGG TTACTTCGAC AACATTGACC ACGACCTGCT GCTGAAATTC CTGAGTAAGC GGATCGCTGA TAACAAATTT CTGGCGCTTC TCAAGAAGTT CCTGAAAACT GGCTATCTGG ACAACTGGCG TTACTTTGGC ACCCATAGCG GGACACCGCA AGGTGGTATT ATTTCCCCTA TTCTTGCCAA TGTATTTCTC CATGAACTTG ATGAGTTTAT GAAAAATAGA ATCAGCGAGT TCGGTACAGG GGGACGAAGG AAACCCAATC CCATATACAA AAGAGCACTA CAGAACCGGG CAAATCGTAT TAAATGGATC AGGCAAGGCT TCGGCGCTTC AGGAATGCCT GCTGATGAGC AGAAAATCCA AAAATGGAAA TACGAAGCGG ATGAACTGGA GAAACAATTG CGCACGCTAT CCAGTGTTAT TATGGATGAT ACTGAATTCA AAAGAATGCG GTATGTTCGA TATGCTGATG ATTTTCTGAT TGGTGTGATA GGAAGTAAAA GTGAGGCAAA AAAGATAATG AAAGAGGTTG TCGATTTTGT TGAAAATGAA CTTCATCTGG AAATATCAAA AGAAAAATCC GGCATTATTG ACCCAAAGAA AGGATTCACT TTTCTCGGTT ATGAAATTAA AACACGCCGT GAAAGCAAAC GGGTCAAATG TGTTGTAGGG CTTAATACAG ATGGAAGTAA AACTCATGCG GTAAAACGTA CGATAACGGA ACATATCCAT CTGGGCGTAC CGAGGGAAAG AATCCTGAAA TTCTGCTCTC TACGTGGCTA TGGGAATTAC GATGGCGGAT ATGGTAACAG CGCTGGTCGG CCAGCAATGA TGCACATGTC TGACTATGAA ATCATTGGTC AGTACAACGC CGAAATGCGC GGCTACGCTA ATTACTACAA TCTCGCGCCC GTTCTCTATC TCAATAAATT GCATTGGATA TGGGAAAATA GTCTTTATAA GACGCTGGCA GGTAAACATC GGACGTCACG CACCAAAATC GCACAGCGAT TAAGGCAAGC GGATGGCAGG TATGTTTATC GGGAAAATCG TAATGGAAAG GTATATGAGT TGGAGGTATT TAGACTCAAA AACAGAAGTG CGCCGAAACA CAGTTCACCG GATATATTGC CGAATACGCA TAAATATTCT GGCAGAACTG AATTGCTGGA CAGGATGGCC GCATGCCAAT GTGAATATTG CGGTACCAGA ACCGGTCCTT TTGAAGTCCA CCATGTGAGG AAACTTAAGG ATATTAAGTC AGGTACAGAT AACTGGAAGA AACTGATGAT TGCCCGTAAT AGGAAAACAT TAGTGCTCTG CCGGACATGT CACGTCAATC TTCACCGAGG AACACTGCCA GACCAAAGAA CCTTTGTTTG A
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Protein sequence | MLSQRTLNAL SGINKASTQG YKIKKLHKIM CSNKDLWAQA YANIYSNQGA MTRGINNNTM DEMSVDRIIN LIQLINSDSY KPKPCRRTHI PKDARKPNGK KRPLGIPTGD DKLIQEVMRM LLEEIYEPVF SDWSYGFRPK RSCHSALKEI RNGWKGTKWV CDVDIKGYFD NIDHDLLLKF LSKRIADNKF LALLKKFLKT GYLDNWRYFG THSGTPQGGI ISPILANVFL HELDEFMKNR ISEFGTGGRR KPNPIYKRAL QNRANRIKWI RQGFGASGMP ADEQKIQKWK YEADELEKQL RTLSSVIMDD TEFKRMRYVR YADDFLIGVI GSKSEAKKIM KEVVDFVENE LHLEISKEKS GIIDPKKGFT FLGYEIKTRR ESKRVKCVVG LNTDGSKTHA VKRTITEHIH LGVPRERILK FCSLRGYGNY DGGYGNSAGR PAMMHMSDYE IIGQYNAEMR GYANYYNLAP VLYLNKLHWI WENSLYKTLA GKHRTSRTKI AQRLRQADGR YVYRENRNGK VYELEVFRLK NRSAPKHSSP DILPNTHKYS GRTELLDRMA ACQCEYCGTR TGPFEVHHVR KLKDIKSGTD NWKKLMIARN RKTLVLCRTC HVNLHRGTLP DQRTFV
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