| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0659 |
|---|
| Symbol | |
|---|
| ID | 8119702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 750236 |
|---|
| End bp | 751543 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644851047 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003003019 |
|---|
| Protein GI | 251788298 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCT ATCAGCACGC ACTGTTATTT TCCTTCATGA CGCTGGGCGC CGTTGCCAGC
AGCAACGCCA TCGCCGAAAA AACACAGATT ACGTTTTTAT ATAGCGACGA TGACCCGGAA
CTGGTCCATT TCATGGAACA GAAGGTGAAG ACGTTTTCAC AAAACAACGA TCACATCGAC
GTGAATTTCG TCAGCACCGG CTATAACGCA CTGCAAACGC AATTGCCGAT GCAACTGGCC
GCCGGTCTCG GGCCGGATAT CGCCAAAACC ACCCAGATGG GCCTGCTCTC CTACACGCTT
GACCTGCGCC CGTATCTGGC CGACCCGGCC GGTTTTGAAA AACGCTACGG CGCCGGCATT
GAAAAAATCA TGCGCATCAA AGGGGTACAC AAAGATAACG CGCTGCCCGG CTTCGTCGCC
TCCTGGACGG CCGACCTGCC GTTCGTTAAC GTCACGCTGT TCCAGCAGGC CGGCGTGCCG
CTGCCGCAAC CGGGTTACAC CCTGGAACAA CTGATGCAGG CGTCAAAACA GGTGGCGGCC
AAAACCGGCG TCGCCATTCC CTTTACCATC GACCGTAGCG GCTTTCGTTT CTCCGGTCCG
GCTTATTCTT ACGGCACACG CTACGAAAAA GACGGTCTGA TCAACTTCCC GGATGCCGCC
GCGCAGGCGT GGATCAAGGA TCTGAAACGT TGGTCGGACG AGGGCATTTT CCCGCGTGAA
ATGTGGGGCG CCGCCGGCGG CGGTCAATAC AAGAGCATGG CGGACGACTT CGTGAACGGC
AACATCGTCA CCTACTTCTC CGGCAACTGG CAGTTAAACC AATTCAGCAA GCAAATCGGC
AACGGTTTCG ACTGGAAAAT GCTGCCGGCG CCCTGCAAGG AAAAATGTAT TTCGATGGGC
GGCGCCACCT TTATCATGCC GTTCAAGACC AGCAAACACC CGAAAGAAGT GGCGGAGTTT
ATGGAATGGC TGGGCAGCGA CGCCATCCAG CGTGAAATCG GCGAGCACTT CAACATTATT
GTCGGCGCCG ATATTCCCGA TCTGCACTAT CAGACCAGGG ATCAGCACGT GATCGACGGG
CTGAACACCG CCCGTACCGA GATAGCCCAC ATCCCGGCTT ACGTGTTCGA CTGGGAAAAA
ATGGAAAGTC TGGGCGGCAA CGAGCTGTAC CCGATTATCC TGACCCGTTT CACCCAATAT
CTGAACAATC AGGTGTCCTA CGACGAGTAT CTGCGCCTGA CGGAAAACGA CGTGAAACGC
CTGAATCAAA CCATCGCCGC CAACCGGCAG CAGCAGAAAG CCCAGTAA
|
|---|
| Protein sequence | MNRYQHALLF SFMTLGAVAS SNAIAEKTQI TFLYSDDDPE LVHFMEQKVK TFSQNNDHID
VNFVSTGYNA LQTQLPMQLA AGLGPDIAKT TQMGLLSYTL DLRPYLADPA GFEKRYGAGI
EKIMRIKGVH KDNALPGFVA SWTADLPFVN VTLFQQAGVP LPQPGYTLEQ LMQASKQVAA
KTGVAIPFTI DRSGFRFSGP AYSYGTRYEK DGLINFPDAA AQAWIKDLKR WSDEGIFPRE
MWGAAGGGQY KSMADDFVNG NIVTYFSGNW QLNQFSKQIG NGFDWKMLPA PCKEKCISMG
GATFIMPFKT SKHPKEVAEF MEWLGSDAIQ REIGEHFNII VGADIPDLHY QTRDQHVIDG
LNTARTEIAH IPAYVFDWEK MESLGGNELY PIILTRFTQY LNNQVSYDEY LRLTENDVKR
LNQTIAANRQ QQKAQ
|
|---|
| |