| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0650 |
|---|
| Symbol | |
|---|
| ID | 8119693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 742719 |
|---|
| End bp | 743549 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644851039 |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_003003011 |
|---|
| Protein GI | 251788290 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATTATG TCGTGGGGTA CACATTGACT GATACGTTGC GTGTAAATGG AGAACGAGTA
AAAGGACAAA GCCGTCTGGA TCAGATTCTG GATTATCTGA AAAGCCATAA TCTGGTGACG
GTGGATGAAC TTGTGACGGT CATTGATGCG TCTCCGGCGA CGATTCGCCG CGATTTGATC
AAGCTTGACG AGCAGGGCGT CATCAGCCGT AGCCACGGCG GGGTGACGCT CAACCGCTTT
ATTCCTTCCC AGCCGACCAC CAATGAAAAG CTGCAGCGTA GCCTGGCGGA AAAACAGGCT
ATCGCCCGGC AGGCCGCCAC ACTGGTGCAG CCGGGCAACG CGGTGGTGCT GGATGCCGGC
ACCACCATGC TGGAGCTGGC GCGTAACCTG ACGCATCTGC CGTTGCGGGT GATCACCGCC
GATTTGCAGA TTGCGCTGTT TCTCTCCGAG TTCAAGCAGA TTGAAGTGAC GATCATCGGC
GGACGTATCG ACGACAGCAG CCAGTCTTGC ATCGGCGAGC ACGGTCGCCG TTTGCTGCGT
AGCGTCTATC CGGATATCGC GTTTATCAGT TGTAACTCCT GGAGCCTGGA GAAAGGCATC
ACCACGCCTA CCGAAGAAAA AGCCGGCATC AAGCAGGATC TGGGCATGAA CGCCAGCCGC
CGGGTGTTGC TGGCCGATAG CAGCAAATAC GGCGCTTACT CGCTGTTTTG CGTTTCGCCG
TTGTCTGAAC TGACCGATAT CATTACCGAC AGCGCATTGC CGCCGGAAGT GGAGCGTCAG
TTACGGGCGC AGCCGTTCAA TTTGCAACTG GTCAATGTAA CAAGCCGCTG A
|
|---|
| Protein sequence | MNYVVGYTLT DTLRVNGERV KGQSRLDQIL DYLKSHNLVT VDELVTVIDA SPATIRRDLI
KLDEQGVISR SHGGVTLNRF IPSQPTTNEK LQRSLAEKQA IARQAATLVQ PGNAVVLDAG
TTMLELARNL THLPLRVITA DLQIALFLSE FKQIEVTIIG GRIDDSSQSC IGEHGRRLLR
SVYPDIAFIS CNSWSLEKGI TTPTEEKAGI KQDLGMNASR RVLLADSSKY GAYSLFCVSP
LSELTDIITD SALPPEVERQ LRAQPFNLQL VNVTSR
|
|---|
| |