| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0631 |
|---|
| Symbol | |
|---|
| ID | 8119674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 716018 |
|---|
| End bp | 716872 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644851020 |
|---|
| Product | regulatory protein AmpE |
|---|
| Protein accession | YP_003002992 |
|---|
| Protein GI | 251788271 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGT TTAGCCTATT GTTGGTCCTG GGGTGGGAGC GGTTGTTTAA GCGTGGCGAC
CACTGGCAAT TGGATCACCA TCTGGAGCGG GTGTTCCGTC ATCTTTCTGC GCCATCGCTG
GCGCAAACAT TGTTGTTGAC CATCGTGGGT ATGGCGGTGG TCCTGGCGGC GCAGTGGTTA
CTCAGTGGAT GGTTGTTTGG TTTGCCGATT TTGCTTCTGT GGATTGCTGT CGGGTTGTTG
TGCATCGGCG CGGGGGAAAT ACGCCGGCAC TATCACCGCT ATATTCAGGC TGCCCAGCGC
GGTGAAGCGG ATGCCTGCCG GGAAATGGCC GAGGAACTGG CATTGGTGCA TGGCCTGCCG
CGTGATGCCG GCGAGCGTGA GCGGCTAAGG GAACTACAAA ACGCGCTGTT ATGGCTAAAT
TTTCGTTTTT ATTTGGCGCC GTTGTTCTGG TTCGTCGCCG CAGGTCCTTA TGGCCCGGTG
GCGCTGGTCG GCTACACGGT ATTGCGCGCC CGACAGTGCT GTCTGGCTCG TCATCATACA
CCGCTGGAAA GAGCGAATTC CGGCGTTGAT ACTCTGCTGC ATTGGCTGGA CTGGATTCCT
GTTCGGCTGG CGGGTGCCGC TTATGCGCTA TTAGGGCATG GTGAGAAGGC GTTGCCGGCT
TGGTTTGCCG CCATGATGGA CGCCCGCTCT TCTCAATACT GGGTGTTGAC CAAACTGGCT
CAATTTTCTC TGGAGCGGGA AGTGCATGAC GACCCGATTG CTACGCCGAG GGCGGCGGTG
TCGCTGGCGA AGAAGGTAAC GTTAGTGCTG GTGGTGGTGG TCGCGTTGCT GACTCTCTAC
GGTACGCTGG TATAA
|
|---|
| Protein sequence | MTLFSLLLVL GWERLFKRGD HWQLDHHLER VFRHLSAPSL AQTLLLTIVG MAVVLAAQWL
LSGWLFGLPI LLLWIAVGLL CIGAGEIRRH YHRYIQAAQR GEADACREMA EELALVHGLP
RDAGERERLR ELQNALLWLN FRFYLAPLFW FVAAGPYGPV ALVGYTVLRA RQCCLARHHT
PLERANSGVD TLLHWLDWIP VRLAGAAYAL LGHGEKALPA WFAAMMDARS SQYWVLTKLA
QFSLEREVHD DPIATPRAAV SLAKKVTLVL VVVVALLTLY GTLV
|
|---|
| |