| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0583 |
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| Symbol | thiP |
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| ID | 8119866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 663794 |
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| End bp | 665407 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644850972 |
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| Product | thiamine transporter membrane protein |
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| Protein accession | YP_003002944 |
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| Protein GI | 251788223 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.221441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGC GCCGTCAGCC GCTAATTCCC GGTTGGCTAT GGCCAGGGCT ACTGGCGGCG
GTGCTATTGA TTAGCACCGC GGCGCTGGCG TTCGCCGCGC TGTGGCTGGA CGCCCCCGCC
ACGCCCTGGC AGTCGCTGTG GGATGACGGC TATCTGTGGC ATGTCGTTCG CTTCAGCTTC
TGGCAGGCGC TGCTGTCGGC GTTGCTTTCC ACCTTACCCG CGCTGTTTCT GGCGCGGGCA
TTGTACCGCC GCCGTTTTCC CGGCCATCGC CTGCTGCTGC GCCTGTGCGC GATGACGCTG
GTGCTGCCGG TGTTGGTGGC GGTATTCGGC ATTCTCAGCG TCTACGGTCG GGAAGGCTGG
CTGGCGCGCC TGCTGATGCA GTTCGGTATC GAATACCGTT TTTCGCCTTA CGGTTTGCAG
GGCATCCTGC TGGCTCACGT CTTTTTTAAC CTGCCGTTGG CAACCCGGCT GTTTTTGCAG
GCGCTGGAAG GGATTGCCAC CGAGCAGCGT CAGTTGGCGG CCCAGCTCGG CCTGCGCGGC
CGGCACTTTT TCCGACTGGT GGAGTGGCCG TGGTTGCGCC GCCAGTTGTT GCCCGCCGTC
GCGCTGATTT TCATGCTGTG CTTCGCCAGC TTCGCCACTG TGCTGGCGCT GGGCGGCGGC
CCGCAAGCTA CCACCATTGA ACTGGCTATC TATCAGGCGC TCAGCTTTGA CTATGACCCG
GCGCGCGCCG CACTGCTGGC ATTACTGCAA ATGGTCTGCT GTCTGGGGTT GGTATTACTC
AGCCAACGGC TCAGTCGGCT GCTGGCGGTA GGCGTCAGCA ACCGCCAGCG CTGGCGCGAC
CCGCAGGACA GCCGGTTCAG CCGGGTTGCC GATACGCTGT TGATTGCGGC GGCGCTGTTG
TTGTTGCTGC CGCCGCTGCT GGCCGTGGTG GCGGACGGCC TGAACCGCTC GCTGCCTGAC
GTATTATTGC GCCAGCCTGC ATTATGGCAA ACGCTCTGGA CCTCGCTGCG CATTGCGCTG
GCCGCCGGCG CGCTCAGCGT GGTGCTGACG TTAATGCTGC TGTGGAGCAG CCGGGAGCTG
AAACTGCGCC GGCAACGGCT ACCCGCGCAA TGGCTGGATA TGAGCGGAAT GCTGATTCTA
GCGATGCCGG GGATTGTGCT GGCGTCCGGT TTCTTCCTGC TGTTCAATCG CACCATCGGG
TTACCGTCTT CCCCTTACGG GCTGATGGTG TTGACCAACG CGCTGCTGGC CATTCCTTAT
GCGATGAAAG TACTGGAAAA CCCGATGGTT GATACGGCGG CGCGTTACGG TTTGCTGTGT
CAGTCGCTGG ATATCCGCGG CTGGCATCGT CTCAGGGTAG TAGAACTGAA AGCGCTGCGC
GCACCTATCG CACAAGCGCT GGCCTTTGCC TGCGTGCTAT CCGTGGGTGA TTTCGGCATC
ATCGCCTTGT TTGGCAACGA GCAGTTTCGC ACTCTGCCGT TTTACCTTTA CCAACAAATT
GGCGCTTATC GCAGCGCCGA TGGCGCGGTA ACGGCGCTGT TGTTGCTGCT GCTGTGCTTT
ATGTTGTTTA CCCTGATTGA GAAACTGGCA GGCATTAATG ATCGCGCTCG ATAA
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| Protein sequence | MATRRQPLIP GWLWPGLLAA VLLISTAALA FAALWLDAPA TPWQSLWDDG YLWHVVRFSF
WQALLSALLS TLPALFLARA LYRRRFPGHR LLLRLCAMTL VLPVLVAVFG ILSVYGREGW
LARLLMQFGI EYRFSPYGLQ GILLAHVFFN LPLATRLFLQ ALEGIATEQR QLAAQLGLRG
RHFFRLVEWP WLRRQLLPAV ALIFMLCFAS FATVLALGGG PQATTIELAI YQALSFDYDP
ARAALLALLQ MVCCLGLVLL SQRLSRLLAV GVSNRQRWRD PQDSRFSRVA DTLLIAAALL
LLLPPLLAVV ADGLNRSLPD VLLRQPALWQ TLWTSLRIAL AAGALSVVLT LMLLWSSREL
KLRRQRLPAQ WLDMSGMLIL AMPGIVLASG FFLLFNRTIG LPSSPYGLMV LTNALLAIPY
AMKVLENPMV DTAARYGLLC QSLDIRGWHR LRVVELKALR APIAQALAFA CVLSVGDFGI
IALFGNEQFR TLPFYLYQQI GAYRSADGAV TALLLLLLCF MLFTLIEKLA GINDRAR
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