| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0555 |
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| Symbol | carB |
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| ID | 8119838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 632290 |
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| End bp | 635514 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644850944 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_003002916 |
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| Protein GI | 251788195 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.770872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGACAT AAAAAGTATC CTGATTCTCG GTGCCGGCCC GATCGTGATC
GGTCAGGCGT GCGAGTTTGA CTACTCCGGC GCTCAGGCGT GTAAAGCGCT GCGCGAAGAA
GGCTACCGCG TGGTTCTGGT GAACTCCAAC CCGGCCACCA TCATGACCGA CCCGGAAATG
GCCGACGCCA CCTATATTGA GCCGATCCAC TGGGAAGTGG TGCGCAAAAT CATCGAAAAA
GAGCGTCCGG ACGCAGTGCT GCCGACCATG GGCGGCCAGA CGGCGCTGAA CTGCGCGCTG
GAGCTGGAAC GTCAGGGCGT GCTGGCGGAG TTCGGCGTGA CCATGATCGG CGCGACCGCC
GATGCCATCG ATAAAGCGGA AGATCGTCGC CGTTTCGACA TCGCGATGAA GAAAATCGGC
CTGGAAACCG CGCGTTCCGG TATCGCGCAC AATATGGACG AAGCGCTGGC AGTGGCGGCG
GATGTGGGTT ATCCCTGCAT TATCCGTCCG TCCTTCACCA TGGGCGGCAC CGGCGGCGGC
ATCGCTTACA ACCGTGAAGA ATTTGAAGAA ATTTGTACCC GTGGTCTGGA CCTGTCGCCG
ACCAAGGAAC TGCTGATCGA CGAATCGCTG ATCGGCTGGA AAGAGTATGA AATGGAAGTG
GTGCGGGATA AAAACGACAA CTGCATCATT GTCTGCTCGA TCGAAAACCT CGATGCGATG
GGCATCCACA CCGGTGACTC CATCACCGTA GCGCCGGCGC AAACCCTGAC CGACAAGGAA
TACCAGATCA TGCGTAACGC CTCGATGGCG GTACTGCGTG AAATCGGGGT GGAAACCGGC
GGTTCCAACG TGCAGTTTGC GGTCAACCCG AAAACCGGCC GTCTGATCGT TATCGAAATG
AACCCGCGCG TGTCTCGCTC CTCGGCGCTG GCTTCCAAAG CGACCGGCTT CCCGATCGCC
AAGATCGCCG CCAAACTGGC GGTGGGTTAT ACGCTGGATG AACTGATGAA CGACATTACC
GGCGGGCGTA CCCCGGCGTC GTTCGAACCG TCCATCGACT ACGTGGTGAC CAAGATCCCA
CGCTTCAACT TCGAGAAATT CGCCGGTGCC AACGATCGTC TGACTACACA GATGAAGTCG
GTGGGCGAGG TGATGGCGAT CGGCCGTACC CAGCAGGAGT CGTTGCAGAA AGCGCTGCGT
GGCCTGGAAG TGGGCGCGAC CGGTTTCGAT CCTAAAGTGA GTTTGGACGA TCCGGAAGCG
CTGACTAAAA TCCGTCGCGA ATTGAAAGAC GCCGGCGGCG ATCGTATCTG GTATCTGGCG
GACGCGTTCC GCGCAGGCAT GTCGGTTGAC GGCGTATTCA ACCTGACCAA CATCGACCGC
TGGTTCCTGG TGCAAATTGA AGAACTGGTG CGTCTGGAAG AGCAGGTGGC GGAGCAGGGC
GCCAACGGCT TGACGCTGGA GTTCCTGCGT GTGCTCAAAC GCAAAGGCTT TGCCGATGCC
CGTCTGGCAA AACTGGCCGG CGTGTCTGAA GGTGAAATTC GCAAACTGCG TTACAAATAC
AACCTGCACC CGGTCTACAA GCGCGTGGAT ACCTGCGCTG CCGAGTTCGC CACCGATACC
GCCTACATGT ACTCCACCTA TGACGAGGAG TGCGAGGCCA ACCCGAATCA GGACCGTGAC
AAGATAATGG TGCTGGGCGG CGGTCCGAAC CGAATCGGCC AGGGCATCGA GTTCGACTAT
TGTTGCGTGC ACGCGGCGCT GGCGCTGCGT GAAGACGGCT ATGAAACCAT CATGGTCAAC
TGTAACCCGG AAACCGTCTC TACCGATTAC GACACCTCCA ATCGCCTGTA CTTCGAGCCG
GTAACGCTGG AAGACGTGCT GGAGATTGTA CGTATTGAGC AGCCGAAAGG CGTGATCGTG
CAGTACGGTG GGCAGACGCC GCTGAAACTG GCGCGTCAGC TTGAAGCCGC CGGTGTGCCG
GTGATCGGCA CCAGCCCGGA TGCCATCGAC CGCGCAGAAG ACCGTGAACG CTTCCAGCAG
GCGGTCAACC GTCTCGGTCT GAAGCAGCCG GCCAACGCCA CCGTCAGCAC TATCGATCAG
GCGGTGGAAA AAGCGGTCGG TATCGGTTAT CCGCTGGTGG TACGTCCGTC TTATGTGTTG
GGCGGCCGGG CAATGGAAAT CGTGTATGAC GAAGTCGATT TGCGCCGTTA CTTCCAGACC
GCCGTCAGTG TTTCCAACGA TGCGCCGGTA CTGCTGGACC GTTTCCTGGA CGACGCGGTG
GAAGTGGATG TGGACGCTAT CTGCGACGGC GAGCGCGTGC TGATTGGCGG CATCATGGAG
CATATCGAGC AGGCCGGCGT GCACTCCGGC GACTCCGCCT GTTCGCTGCC GGCTTACACC
CTGAGCAAAG AGATTCAGGA TGAGATGCGC CGTCAGGTGG AAAAACTGGC GTTCGAACTT
TCCGTACGTG GCCTGATGAA CGTGCAGTTT GCGGTGAAGA ACAACGAAGT GTACCTGATT
GAGGTTAACC CGCGCGCCGC CCGTACCGTG CCGTTTGTTT CCAAGGCGAC CGGTGTGCCG
CTGGCGAAAG TGGCCGCCCG CGTGATGGTT GGGCAAACGC TGGCTCAGCA GGGCGTCACC
AAAGAGGTGA TTCCACCGTA CTATTCCGTT AAGGAAGTGG TGCTGCCGTT TAATAAATTC
CCGGGTGTTG ACCCGATCCT CGGGCCGGAA ATGCGTTCCA CCGGTGAGGT GATGGGCGTG
GGTCGTACCT TTGCCGAAGC CTTTGCCAAG GCGATGCTGG GCAGCAACTC GCCGATGAAG
AAAACCGGTC GCGCGTTGCT GTCGGTGCGT GAAGGCGACA AGGCGCGGGT GGTGGATTTG
GCCGCTAAAC TGCTCAAGCA CGGTTTTGAA CTGGACGCCA CTCACGGCAC CGCGGTAGTG
CTGGGCGAAG CGGGTATTAA TCCGCGTCTG GTGAACAAGG TGCATGAAGG CCGTCCGCAC
ATTCAGGATC GCATCAAGAA TGGCGAGTAC ACCTACATCG TCAACACAAC GGCGGGCCGT
CAGGCGATTG AAGATTCCAA ACTGATTCGC CGCAGTGCGC TGCAATATAA AGTGCATTAC
GACACCACCA TGAACGGCGG TTTCGCGACA GCCATGTCGC TGAATGCCGA CCCGACCGAG
CAGGTGATTT CCGTTCAGGA AATGCATGGC CGTATTCAGG GATAA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVVLVNSN PATIMTDPEM
ADATYIEPIH WEVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLAE FGVTMIGATA
DAIDKAEDRR RFDIAMKKIG LETARSGIAH NMDEALAVAA DVGYPCIIRP SFTMGGTGGG
IAYNREEFEE ICTRGLDLSP TKELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENLDAM
GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFAVNP KTGRLIVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELMNDIT GGRTPASFEP SIDYVVTKIP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVSLDDPEA
LTKIRRELKD AGGDRIWYLA DAFRAGMSVD GVFNLTNIDR WFLVQIEELV RLEEQVAEQG
ANGLTLEFLR VLKRKGFADA RLAKLAGVSE GEIRKLRYKY NLHPVYKRVD TCAAEFATDT
AYMYSTYDEE CEANPNQDRD KIMVLGGGPN RIGQGIEFDY CCVHAALALR EDGYETIMVN
CNPETVSTDY DTSNRLYFEP VTLEDVLEIV RIEQPKGVIV QYGGQTPLKL ARQLEAAGVP
VIGTSPDAID RAEDRERFQQ AVNRLGLKQP ANATVSTIDQ AVEKAVGIGY PLVVRPSYVL
GGRAMEIVYD EVDLRRYFQT AVSVSNDAPV LLDRFLDDAV EVDVDAICDG ERVLIGGIME
HIEQAGVHSG DSACSLPAYT LSKEIQDEMR RQVEKLAFEL SVRGLMNVQF AVKNNEVYLI
EVNPRAARTV PFVSKATGVP LAKVAARVMV GQTLAQQGVT KEVIPPYYSV KEVVLPFNKF
PGVDPILGPE MRSTGEVMGV GRTFAEAFAK AMLGSNSPMK KTGRALLSVR EGDKARVVDL
AAKLLKHGFE LDATHGTAVV LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIVNTTAGR
QAIEDSKLIR RSALQYKVHY DTTMNGGFAT AMSLNADPTE QVISVQEMHG RIQG
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