Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0545 |
Symbol | nhaR |
ID | 8119828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 621237 |
End bp | 622127 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644850934 |
Product | transcriptional activator NhaR |
Protein accession | YP_003002906 |
Protein GI | 251788185 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCACA TCAACTTCAA TCATCTCTAT TATTTCTGGC AAGTGTGCAA GACCGGTTCG GTGGCGGGGG CCGCCGAACG GCTATTTTTG ACGCCGCAGA CCATTACCGG GCAAATCAAG TTGCTGGAAG AGCGGCTACA GGGAAAGTTG TTCAAGCGTA AAGGGCGCGG GCTGGAGCCG ACGGAGTTGG GGCAGTTGGT GTTTCGCTAT GCGGACAAGA TGTTTGCACT GAGCCAGGAA ATGCTGGATA TCGTGAATTA CCGTAAGGAA TCCAGCCTGC TGTTTGATGT TGGTGTGGCG GATGCGTTGT CCAAACGATT GGTGAGTCGG GTACTGGAAA CCGTAGTGAA TGAACAAATG CCGATTCACC TGCGCTGCTT CGAGTCGACC CATGAAATGC TGATTGAACA GCTGAGTCAG CACAAGCTGG ATATGATCCT GTCGGATTGC CCGGTGGATT CCGGCCAGCA GGCGGGGTTA TTTTCCCGCA AGCTCGGCGA GTGCGGCGTG AGTTTCTACT GCCGTCGGCC AGGCCCGGAG GTGCCTTTTC CTGCTTGTTT GTCGCAAAGC AAGTTATTGA TCCCGGCTCG CCGTACCATG CTGGGCCGCA AGCTGCTCAG TTGGTTCAGC GAGCAGAATC TACCGGTCGA TATTATGGGC GAGTTTGACG ACGCGGCGTT GATGACCGCT TTCGGCATGA GTCACGATGC GATTTTTATT GCACCGTCGC TACATGCGGA TGAAATGGCG GCTCAGGGCG AGATTATGGA AATCGGCCGC ATTGATAATA TTCAGGATGA GTATTACGTT ATTTTCGCAG AGCGGATGAT TCAGCATCCG GCGGTGCAGC GTGTCTGCAA CGAGGATTTC TCTTCCCTGT TTCGTGAATA A
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Protein sequence | MSHINFNHLY YFWQVCKTGS VAGAAERLFL TPQTITGQIK LLEERLQGKL FKRKGRGLEP TELGQLVFRY ADKMFALSQE MLDIVNYRKE SSLLFDVGVA DALSKRLVSR VLETVVNEQM PIHLRCFEST HEMLIEQLSQ HKLDMILSDC PVDSGQQAGL FSRKLGECGV SFYCRRPGPE VPFPACLSQS KLLIPARRTM LGRKLLSWFS EQNLPVDIMG EFDDAALMTA FGMSHDAIFI APSLHADEMA AQGEIMEIGR IDNIQDEYYV IFAERMIQHP AVQRVCNEDF SSLFRE
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