| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0508 |
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| Symbol | |
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| ID | 8120244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 573782 |
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| End bp | 575758 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644850897 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_003002869 |
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| Protein GI | 251788148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.595355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACG ATATGATTCA ACCGTACTCG TCAGCGACGG GTAAACACGA TCATCTGCGC
TCCATGCAGG AGGTAGCCAT GAATGACCGC GACGCCAGCG AGATGCTGAG AACCTATAAC
ATTGCCTGGT GGGGTAATAA TTATTACGAC GTCAATGAGT TAGGACATAT CAGCGTGTGT
CCGGACCCTG ACGTGCCGGA AGCCCGCGTC GACCTGGCCA AACTAGTGAA AACCCGTCAG
CAGGATAATC AGCGCCTGCC TGCGCTGTTT TGCTTCCCAC AGATTTTGCA GCACCGTTTG
CGCTCCATCA ATGCGGCGTT CAAACGCGCG CGCGAGTCCT TCGGCTATGA AGGCGGTTAT
TTCCTGGTTT ATCCCATCAA AGTTAACCAA CATCGCCGTG TCATTGAGTC GCTGATCAAT
TCCGGCGAGC CGCTGGGGTT GGAAGCCGGT TCCAAAGCCG AGCTGATGGC GGTACTCGGC
CATGCGGGCA TGACCCGCAC CGTGATCGTC TGTAACGGCT ATAAAGACCG CGAGTATATT
CGCCTGGCGC TGATCGGTGA AAAACTGGGT CACAAGGTGT ATCTGGTCAT CGAAAAGATG
TCGGAAATCA AGCTGGTGTT GGAAGAAGCC GAACGCCTGA ACGTGGTGCC GCGCTTGGGC
GTACGTGCGC GTCTGGCGTC GCAGGGTTCC GGCAAATGGC AGTCCAGCGG CGGCGAGAAA
TCCAAGTTTG GCCTGGCGGC GACGCAGGTA CTGCAACTGG TGGAACTGCT ACGCAATGCC
AACCGTCTCG ATAGCCTGCA ACTGCTGCAT TTCCATCTGG GATCGCAGTT GGCGAATATC
CGCGATATCG CGACCGGCGT ACGTGAATCG GCACGTTTTT ACGTCGAACT GCACAAACTG
GGCGTGAATA TCCAGTGTTT TGACGTAGGT GGTGGGCTCG GCGTGGATTA TGAGGGAACG
CGTTCCCAGT CCGACTGTTC GGTCAACTAT GGCCTGAACG AATACGCCAA CAACGTCATC
TGGGGTATCG GCGACGCCTG TAATGAGTAT GGTTTGCCGC ATCCGATGGT GATCACCGAA
TCCGGGCGTG CGGTGACGGC GCATCACACC GTACTGGTGT CCAATATTAT CGGGGTGGAG
CGCAACGAGT TCAGCGAGCC GGTGGCGCCG GATGAAGACG CGCCGCGTGC GCTGGAAAGC
TTATGGAGCA CCTGGCAGGA AATCCAGGAG CCGGGCAACC GTCGTTCGCT GCGTGAATGG
TTGCACGACA GCCAGATGGA CCTGAACGAC GTCCACACGC AATATACCCA CGGCATGTTG
GATTTGACCC AGCGCGCGCA AGCGGAACAA CTCTACCTGA ATATCTGCCA GCGTCTTCAG
CAGCAGCTTG ACCCGAGTAA CCGCGCCCAT CGGCCGATTA TCGATGAATT GCAGGAACGC
ATGGCGGATA AGTTGTACGT CAACTTCTCG CTGTTCCAGT CGATGCCGGA TGCCTGGGGG
ATCGATCAGT TGTTCCCGGT GTTGCCGCTG GAAGGGTTGG ATAAGCCGCC GCAGCGCCGT
GCGGTACTGC TGGATATCAC CTGTGATTCC GACGGCACCA TCGATCACTA CGTGGATGGC
GATGGTGTGG CCACGACGAT GCCGATGCCG CCGTACGACC CGGAAAACCC GCCGTTGCTC
GGGTTCTTCA TGGTGGGTGC GTATCAGGAA ATTCTCGGCA ATATGCACAA CCTGTTCGGC
GACACGTCCA CCGTGGATGT GTTTGTATTC CAGGATGGGA CGGTTGAGCT GGAAGAGTCG
GATGAAGGCA ACACGGTGGC CGATATGCTC GAATATGTGC AACTTGACCC GAATGTGCTG
ATGTCCCGTT TCCGCGATCA GGTAAAAGAA ACCGACCTCG CGCCTGAACT GCAAGCGCAA
TTCCTTGAAG AATTTGAAAC CGGCTTATAC GGTTATACTT ATCTGGAAGA CGAATAA
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| Protein sequence | MSDDMIQPYS SATGKHDHLR SMQEVAMNDR DASEMLRTYN IAWWGNNYYD VNELGHISVC
PDPDVPEARV DLAKLVKTRQ QDNQRLPALF CFPQILQHRL RSINAAFKRA RESFGYEGGY
FLVYPIKVNQ HRRVIESLIN SGEPLGLEAG SKAELMAVLG HAGMTRTVIV CNGYKDREYI
RLALIGEKLG HKVYLVIEKM SEIKLVLEEA ERLNVVPRLG VRARLASQGS GKWQSSGGEK
SKFGLAATQV LQLVELLRNA NRLDSLQLLH FHLGSQLANI RDIATGVRES ARFYVELHKL
GVNIQCFDVG GGLGVDYEGT RSQSDCSVNY GLNEYANNVI WGIGDACNEY GLPHPMVITE
SGRAVTAHHT VLVSNIIGVE RNEFSEPVAP DEDAPRALES LWSTWQEIQE PGNRRSLREW
LHDSQMDLND VHTQYTHGML DLTQRAQAEQ LYLNICQRLQ QQLDPSNRAH RPIIDELQER
MADKLYVNFS LFQSMPDAWG IDQLFPVLPL EGLDKPPQRR AVLLDITCDS DGTIDHYVDG
DGVATTMPMP PYDPENPPLL GFFMVGAYQE ILGNMHNLFG DTSTVDVFVF QDGTVELEES
DEGNTVADML EYVQLDPNVL MSRFRDQVKE TDLAPELQAQ FLEEFETGLY GYTYLEDE
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