Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0503 |
Symbol | |
ID | 8120239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 569409 |
End bp | 570143 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644850892 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_003002864 |
Protein GI | 251788143 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000164616 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAATAC CGCGCATTTT TCATCCCGAT ACGCTTGCCC TGCTGGGGGG AGAGATGGAT CTAAGCGAAG ACGCCGCCAA CCATGTTGGC CGGGTGCTTC GAATGAGCGC CGGGCAGGCA TTGCAACTGT TCGACGGCAG CAACCAGGTA TTTGACGCCG AGATTATCCA GGCCGGGAAA AAAAGCGTGC GGGTCCGTTA CGCTGCCGGG CAAACCGAAA ATCGGGAGTC ACCGTTACAC CTGCACCTGG GCCAGGTGAT GTCTCGTGGT GAAAAGATGG AATTCACCAT CCAAAAATCC ATCGAACTGG GGGTGAATAT TATTACCCCG CTGCTATCCG AACGCTGCGG CATCAAACTG GACGGCGAAC GACTGGAAAA GAAAATTTCA CAATGGCAGA AAATCGCCAT CGCCGCCTGT GAACAATGCG GCAGAAATCG CGTGCCGGAA ATTCGTCCCG TACAAACGCT GGAAAGCTGG TGCGCGGAAT CGGACAATGG GTTAAAACTG AACCTGCATC CACGAGCAAC GCAAAGCATC AACACGCTGC CGTTGCCGGT ATCACGCATC CGGTTGTTGA TTGGCCCGGA AGGCGGGCTG TCGGCAGATG AAATCGCCAT GACCGCAACC CAGGGGTTTA CTGATATCCT GCTGGGGCCT CGCGTTCTGC GCACAGAAAC CACCGCGCTC ACCGCCATCA CCGCGTTACA GGTACGGTTC GGCGATTTGG GGTAA
|
Protein sequence | MRIPRIFHPD TLALLGGEMD LSEDAANHVG RVLRMSAGQA LQLFDGSNQV FDAEIIQAGK KSVRVRYAAG QTENRESPLH LHLGQVMSRG EKMEFTIQKS IELGVNIITP LLSERCGIKL DGERLEKKIS QWQKIAIAAC EQCGRNRVPE IRPVQTLESW CAESDNGLKL NLHPRATQSI NTLPLPVSRI RLLIGPEGGL SADEIAMTAT QGFTDILLGP RVLRTETTAL TAITALQVRF GDLG
|
| |