Gene Dd1591_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0498 
Symbol 
ID8120234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp564685 
End bp566067 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content57% 
IMG OID644850887 
ProductUDP-N-acetylmuramate 
Protein accessionYP_003002859 
Protein GI251788138 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATTC ATATTTTAGG AATCTGTGGC ACCTTCATGG GAGGACTGGC GTTGCTGGCC 
CGATCGCAAG GACATCAGGT AACCGGTTCG GATGCTAACG TCTATCCGCC AATGAGTACC
TTACTGGAAG AACAAGGAAT TACCCTGATC CAGGGGTACG ACCCCGCACA GTTGGATCCC
GCTCCGGATC TGGTCATCAT TGGCAATGCC ATGACCCGCG GCAACCCCTG CGTTGAGGCG
GTGCTGGAAC AAAATATCCC GTATATGTCC GGCCCGCAAT GGCTCCATGA TCATGTGCTG
CGCGAGCGCT GGGTCATCGC CGTCGCCGGC ACCCACGGTA AAACGACGAC GGCGGGCATG
GTCACCTGGA TTCTGGAAGA TTGCGGCTAC CAGCCGGGAT TCGTCATTGG CGGCGTACCG
GGCAACTTCA CGGTTTCCGC ACGTCTGGGC GACAGCCCGT TCTTCGTGGT GGAAGCCGAC
GAGTACGACT GCGCCTTCTT CGACAAGCGC TCCAAGTTCG TGCACTACAG CCCGCGCACG
CTCATTCTGA ATAATCTGGA ATTTGACCAC GCCGACATCT TTGACGATCT CAAAGCTATC
CAGAAACAGT TCCATCATCT GGTGCGCCTG GTGCCGGGCA AAGGCCGCAT TATCGTCCCG
ACTCACGACC TGCATTTGAA ACAGGTGATG GGCATGGGAT GCTGGAGCGA GCAGGAACTG
GTGGGTGAAG AAGGCATCTG GAAAGCGAAA AAAGTCACCA CCGACGCCAG TGTGTTTCAG
GTGTACCTCA ACGACCAGAT AGTGGGGGAA GTCGACTGGA ATCTGGTGGG CGAACACAAC
ATGCACAACG GCCTGATGGC AATCGCTGCG GCACGTCATG TCGGCGTCAC TCCGGCAGAA
GCCTGTCGTG CGCTCGGCGG TTTCATTAAC GCCCGTCGTC GGCTGGAACT ACGCGGCACC
GCACATGGTG TCTCTGTGTA CGATGATTTT GCCCATCACC CAACCGCGAT TCTCGCCACG
CTGGCTGCCC TGCGCAGCAA AGTAGGAGGC ACCGCACGGA TTCTCGCGGT ACTGGAGCCT
CGTTCCAACA CAATGAAAAT GGGTCATTGC AAAAACGAGT TAGCACCGGC GCTGGGACGC
GCTGACGGGG TGTTCCTGTT CCAGCCGCAA CACATTCCCT GGCAGGTCGC TGAAGTGGCC
GACGCGTGTG TTCAACCCGC CTGGTGGAGC GCAGATATCG ATACACTGGT GGAGATGATC
AACAAAACCG CGCAACCGGG CGATCATATT CTGGTCATGA GCAACGGCGG CTTCGGCAAT
ATCCACAACA AACTGCTGGA TGCGCTGAAC GCCAAAGCAC AGGCTGCCAG CAACGAAGAC
TGA
 
Protein sequence
MRIHILGICG TFMGGLALLA RSQGHQVTGS DANVYPPMST LLEEQGITLI QGYDPAQLDP 
APDLVIIGNA MTRGNPCVEA VLEQNIPYMS GPQWLHDHVL RERWVIAVAG THGKTTTAGM
VTWILEDCGY QPGFVIGGVP GNFTVSARLG DSPFFVVEAD EYDCAFFDKR SKFVHYSPRT
LILNNLEFDH ADIFDDLKAI QKQFHHLVRL VPGKGRIIVP THDLHLKQVM GMGCWSEQEL
VGEEGIWKAK KVTTDASVFQ VYLNDQIVGE VDWNLVGEHN MHNGLMAIAA ARHVGVTPAE
ACRALGGFIN ARRRLELRGT AHGVSVYDDF AHHPTAILAT LAALRSKVGG TARILAVLEP
RSNTMKMGHC KNELAPALGR ADGVFLFQPQ HIPWQVAEVA DACVQPAWWS ADIDTLVEMI
NKTAQPGDHI LVMSNGGFGN IHNKLLDALN AKAQAASNED