| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0492 |
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| Symbol | hfq |
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| ID | 8120228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 558909 |
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| End bp | 559208 |
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| Gene Length | 300 bp |
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| Protein Length | 99 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644850881 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_003002853 |
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| Protein GI | 251788132 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00316881 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAGG GGCAATCTTT GCAAGATCCG TTCTTGAACG CTTTGCGTCG TGAACGTGTT
CCGGTTTCGA TTTATTTGGT TAACGGCATC AAACTGCAAG GCCAGATTGA GTCTTTCGAT
CAGTTTGTGA TTCTGCTGAA AAACACGGTT AGTCAGATGG TGTACAAACA CGCCATTTCA
ACGGTAGTTC CTTCTCGCCC GGTGTCGCAT CATAGTAATA ATCCTGGCCC AAATAACTAC
CATGCCAACA ATCAGGCGGC GCAGCAGCAG CCGCAGCAGG AAAGTGATGA CGCTGAATAA
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| Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS
TVVPSRPVSH HSNNPGPNNY HANNQAAQQQ PQQESDDAE
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