| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0403 |
|---|
| Symbol | |
|---|
| ID | 8118491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 464598 |
|---|
| End bp | 465608 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644850798 |
|---|
| Product | Alpha/beta hydrolase fold-3 domain protein |
|---|
| Protein accession | YP_003002772 |
|---|
| Protein GI | 251788051 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAA GTCTTGTTGC AGCCTTACTG GTTGCTATAG CGGGGAATGC CGCTGCAGTG
GACAACAACA CGCCGTATGC TGAGCGCCAT GTTCGGGCGT TTCTGGATAA ACTGAACGCA
GGCGGCGGCA AGCCGATTGA ACAGCTGTCG CCGGCTGAAG CACGTGAAGT ACTGGTGTCG
GCACAGGCGG GGGCGAACCT GCCGACGGCC GACGTCACCC AGAAAACCGT TACCGTCGAC
GGCCAGAAGA TCCCGCTGAT TATCGTCAAA CCGGCGGGCA GCACCGGTGT GCTGCCGGTA
TTCATGTTCT TCCACGGCGG CGGCTGGATC CTGGGGGATT ACCCGACGCA TGAACGCTTT
GTGCGAGATC TGGTGGTACA GTCCGGCGCA GCGGCGGTGT TCGTCGATTA CTCGCGGTCG
CCGGAGGTGC ATTATCCGGT GGCGATTCGT CAGGCGTATG CCGCAACCCG TTGGGTAGCG
GAGAATGGTA AAGAGATCGG CGTTGACGGC TCACGGCTGG CGCTGGCAGG CAACAGCGTA
GGCGGCAACA TGGTGGCGGC GGTGGCGCAG CAGGCCAAAC AGGCCGGTAC ACCGCGTATT
CGCTATCAGG TCATGTTCTG GCCGGTGACC GACGCCAACT TCGACACGGC GTCTTACCAG
CAGTTCCAGA AAGGGTATTT CCTGAGCCGC AGCATGATGG AATGGTTCTG GGATGCCTAC
ACCACCGACA GCAAGCAGCG CCGCGATGTG CTGGCCTCAC CGTTGCAGGG CACCCGCGAG
CAACTGAAAG GCTTGCCGCC GGCACTGATT CAAACCGCAG AGCTGGACGT GCTGCGCGAC
GAGGGCGAAG CCTACGGCCG TAAGCTGGAT GCCGCCGGGG TCGATGTTAC CGTCACGCGT
TATAACGGCA TGATCCATGA CTTCGGTCTG TTGAATGCGC TGAGTGATGT GCCGGCCACC
CGTGCCGCGC TGTTGCAGGC GTCCACCGAA CTGCGCGAAC GACTGAAATA A
|
|---|
| Protein sequence | MRKSLVAALL VAIAGNAAAV DNNTPYAERH VRAFLDKLNA GGGKPIEQLS PAEAREVLVS
AQAGANLPTA DVTQKTVTVD GQKIPLIIVK PAGSTGVLPV FMFFHGGGWI LGDYPTHERF
VRDLVVQSGA AAVFVDYSRS PEVHYPVAIR QAYAATRWVA ENGKEIGVDG SRLALAGNSV
GGNMVAAVAQ QAKQAGTPRI RYQVMFWPVT DANFDTASYQ QFQKGYFLSR SMMEWFWDAY
TTDSKQRRDV LASPLQGTRE QLKGLPPALI QTAELDVLRD EGEAYGRKLD AAGVDVTVTR
YNGMIHDFGL LNALSDVPAT RAALLQASTE LRERLK
|
|---|
| |