Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0391 |
Symbol | |
ID | 8118479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 443204 |
End bp | 444118 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644850786 |
Product | Tail Collar domain protein |
Protein accession | YP_003002760 |
Protein GI | 251788039 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.360825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGTG CCCAACGTTT TTTTACCCAA TCAGCCATTG CTGCGGCACT GAGTGTCGGT ATGTTTCTAC CGCAAGCGGC GCTCGCCTGT AATGGGGCGG GTGATGAGTT TATTGGCAGC GTTTGCTATA TGGCTATCAG GTATTGCCCT GAGGGGTACT TGCCCGCCGA TGGCCGAACG TTGAACGTCA ATGGTTATCA GGCGCTCTAT TCACTGATTG GCAATATCTA CGGCGGTACA GCCCCGACGA CCTTTAGTCT ACCCGATCTG CGCGGCAAAA CCGCGATCGG TACAGGTACG GTAGCCACTC AATCAGGTAA TGTCACTTAC ACGCTCGGTA AAGCCATTGG TCAGGAAACT GCAATAGGAA ACGGCAGCGG GTCGGTCGTT CTCAACGCCT CGCAAGTCCC TCCGCACACC CACCCGGCGA CACTGTCGCT GAGTGGAACC AGCAGTACGG TTTCCCTTCC GCTTTCCGGC AGCATCACCA ATCTGCCTTT TAATGCCGTT GCCAGCCTTG GTGTCACCGG GATTGCCAAA ATCGGCTCAT CAACCACGGT CAGCAGAAGC GTCAATCTGA CCGATAAAGC CTTACTAACC TCTGTCAGCG GGCCTGCTGC GTTGCTCTAC GCGCCAGCGG GTGCGGCCAA CGACAGGCAA CTGGGGCCGG ATGGCAGCGT AACAGGAACC GCCAGCGGTT CAGTCGCCGG AACAGCCAGC GGCGGTCAGT TATCAGGGTC GGCGGCCGGC ACGGTCACCC TGCCGTTAAC GGGTACGGTG AATGTTGGAG CCAATGTCAC GACACCCAAT CCTGTGGTGA TACCTGTGTC GATATCGGTG CCGGTGCGTG ACCCGTCATT GCCACTGACG GCCTGTATCG CGGTGACAGG TCTTTATCCG GTCAATCCCG GCTGA
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Protein sequence | MKRAQRFFTQ SAIAAALSVG MFLPQAALAC NGAGDEFIGS VCYMAIRYCP EGYLPADGRT LNVNGYQALY SLIGNIYGGT APTTFSLPDL RGKTAIGTGT VATQSGNVTY TLGKAIGQET AIGNGSGSVV LNASQVPPHT HPATLSLSGT SSTVSLPLSG SITNLPFNAV ASLGVTGIAK IGSSTTVSRS VNLTDKALLT SVSGPAALLY APAGAANDRQ LGPDGSVTGT ASGSVAGTAS GGQLSGSAAG TVTLPLTGTV NVGANVTTPN PVVIPVSISV PVRDPSLPLT ACIAVTGLYP VNPG
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